Calothrix sp. 336/3: IJ00_05885
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Entry
IJ00_05885 CDS
T03937
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
calh
Calothrix sp. 336/3
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
calh03000
]
IJ00_05885
Transcription factors [BR:
calh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IJ00_05885
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Paralog
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_6
SDH_C
Motif
Other DBs
NCBI-ProteinID:
AKG20895
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Position
1490271..1491125
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AA seq
284 aa
AA seq
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MDLARATPQTTNLSSKNRGWENILVEQHQHPPGEASCHYPHEHTIYLSLASRPVVLQHTQ
AGKTYKGLYGKGDISISPVDVPFSCRWDADDRFLQICISATFMDSVAKENIDRDRLELIP
QFRTRDSQIEAIGMMLLTELQQENMGSSLYVESLTNLLAVHLLRQYTTFKVNLGTYTGGL
PQNQMMQVLEYIDSSLHEDIKLADLAALLDMSQFHFSHLFKQSMGIAPYQYLLQQRIERA
KLLLKQSDRSIIEIAFDCGFSSHSHLSKQFRQWTGMTPKAYRVN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatttagctagagcaacgccacaaactaccaacctatctagtaaaaatcgcggttgg
gaaaatattctagttgagcaacaccaacatcctcctggtgaagcaagttgccattatccc
catgaacacacaatttatttgtccctcgcatcccgtcccgttgtcttgcagcacacccaa
gcagggaagacttacaagggattatatggcaagggtgatatttcgatttcacctgtggat
gtgcctttttcctgtcgttgggatgctgacgatcgcttcttacaaatctgcatctctgca
acttttatggatagtgttgccaaggaaaatattgatcgcgatcgcctggaattaatcccc
caatttcgcacacgggattctcaaattgaagcaattgggatgatgttgctgactgaactg
caacaggaaaatatgggttcaagtttgtatgtcgaatccttgacaaatctgctggcagtg
catttgctcagacaatacacaactttcaaggtgaatctgggaacttataccggtggattg
cctcaaaaccagatgatgcaagtattggaatatatcgattcatctctgcatgaagatatt
aagctggcagatttagctgcattgttggatatgagccaatttcattttagccatctgttt
aaacagtcaatgggaattgctccctaccaatacttgcttcaacaacgcatagaacgggca
aaactgttactcaaacaaagcgatcgctcgattatagaaattgctttcgattgtggattt
agcagccacagtcatttaagtaaacagtttcgccagtggacgggaatgacaccaaaggct
tatcgagtcaattaa
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