Calothrix sp. 336/3: IJ00_08990
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Entry
IJ00_08990 CDS
T03937
Name
(GenBank) peptide ABC transporter permease
KO
K02034
peptide/nickel transport system permease protein
Organism
calh
Calothrix sp. 336/3
Pathway
calh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IJ00_08990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calh02000
]
IJ00_08990
Transporters [BR:
calh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IJ00_08990
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
PMT_4TMC
DUF2275
Motif
Other DBs
NCBI-ProteinID:
AKG24531
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Position
complement(2177701..2178630)
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AA seq
309 aa
AA seq
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MSKQFQSSVLTIGNNDVLSSRNIRQDVWNKFRRNPQAILGTIMLVIIILSVIFIPLIYTS
PINKIDFTKATLPPNWEHPFGTNDLGQDILARILYGGRISIAVGIFSMLVAISVGTFIGA
ISGFYGGWIDIVLMRFTDLCLALPRLPLLLLIIFLFRDSLKAFAGAELGIFILIVVLIGG
LNWMSVARLVRAGFLTVRETEFVAAARTLGASPSRLILIHILPNVMSPVIVAGTLSVSAA
IITESTLSFLGLGFPPDIPTWGRMLYDAQNFLEIAPHMVIFPGAAIFLTVLSINYIGDGL
RDALDPRLL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atttctaagcaatttcaaagttcagtattgactataggtaataatgacgtacttagttcg
agaaatattagacaagatgtatggaataaatttcgccgtaatcctcaagcaatattgggt
acgataatgttagtcataattattcttagtgtgatttttattcctttgatttatacatct
cctatcaataaaattgactttaccaaagcaactctgcctccaaactgggagcatcctttt
ggaactaatgacttgggtcaagatattttagctagaattttatatggtggcaggatatca
atagcagttggtattttttcaatgttagtagcaatatctgtaggaacttttattggagca
atatccggcttttatggtggttggatagatatagttttaatgcgctttactgatttatgt
ttggctttaccacgactaccattactgttattaatcatatttttatttcgcgattccctc
aaagcattcgctggggctgagttaggtatattcatattaattgttgtcttaattggtggg
ctgaattggatgtctgtagcaagattggtaagagcaggttttttaacagtgcgggaaaca
gaatttgtcgctgctgctcgaacccttggtgcttcacctagcaggttaatcttaattcat
attcttcccaatgtaatgagtcctgtaatagtggcgggtactctttcagtgagtgcagca
attattactgaatctacccttagttttttaggtttaggctttcccccagatattccaact
tggggaagaatgctttatgatgcacaaaactttttagaaattgctccccacatggtaatt
ttcccaggtgcagcaatatttctgactgttttaagtattaactatataggcgatggtttg
agggatgccttagacccaagattgttataa
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