Calothrix sp. 336/3: IJ00_09925
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Entry
IJ00_09925 CDS
T03937
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh03030
DNA replication
calh03430
Mismatch repair
calh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IJ00_09925
03430 Mismatch repair
IJ00_09925
03440 Homologous recombination
IJ00_09925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calh03032
]
IJ00_09925
03400 DNA repair and recombination proteins [BR:
calh03400
]
IJ00_09925
Enzymes [BR:
calh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IJ00_09925
DNA replication proteins [BR:
calh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IJ00_09925
DNA repair and recombination proteins [BR:
calh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IJ00_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
DnaA_N-like_STI
AAA_30
RuvB_N
AAA_19
AAA_16
PIF1
AAA_5
RCF1-5-like_lid
AAA_24
AAA_18
Glyco_tranf_2_5
Herpes_Helicase
AAA_11
DNA_pol3_delta_C
AAA_28
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AKG21549
UniProt:
A0A0T7BR08
LinkDB
All DBs
Position
2358348..2360516
Genome browser
AA seq
722 aa
AA seq
DB search
MSYVPLHHKYRPKSFAELVGQEAIATTLTNAINGEKIAPAYLFTGPRGTGKTSSARILAK
SLNCLKSDKPTAQPCGVCDVCQGITKGYSLDVIEIDAASNTGVDNIRELIEKAQFAPVQC
RYKVYVVDECHMLSNQAFNALLKTLEEPPKHVVFVLATTDPQRVLPTIISRCQRFDFRRI
PLDAMVQHLRAIADKENISINQEAITLVAQISQGGLRDAESLLDQLGLLTAEVTPDQVWD
LVGSVSERDLLMLVQAIASNNAEIVLDSTRKILDRGREPLVILQNLASFYRDLLIAKTAP
TRSDLVPCTSETWQAMVSFAQQLDTTNILVGQQHLRTSEIQLKNTTQPRLWLEVTLLGLL
PSATPQPVSYQPAPQQAPQPVSYQPAPQQAPQPVSYQPAPQQAPQPVNSQPAPQQAPQPV
SYQQAPQPVSYQPAPQQAPPPVNSQPAPQQAPQPVSYQPAPQQAPQPVSYQPAPQQAPPP
ANSQPAPQQLPQPVNPVSFDTSLEEIWQQVLNALPVPPKALLKEHGRLLSISETSATVGV
PPKLVKLAQGKIPDVEAAFWRTSQKKIKVSFVANQAVNNSAPATQPNPVNSVAPTPLETG
QNPPTAHHTPAPTYEPTPVVEQYPSVQPVVQPVVQPVVQPVIQPVAQPVASYAKPEPVAA
PSALHTTPPPTANWEPDELEIAAQRLAHFFDGEIIDFSDDIQVGKQIAPNDFTEEIEIDV
DF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgtaccgctacatcacaagtatcgtcccaagagttttgctgaattggtgggg
caagaggcgatcgccactactctgactaatgccattaatggggaaaaaattgctcctgct
tatctatttaccggaccaaggggaacgggtaaaacttccagcgcgcggattttagccaaa
tctctcaattgtctcaaaagtgacaagcctacagcccaaccctgtggtgtttgcgatgtt
tgtcagggaatcactaagggttattccttggatgtgattgaaatcgatgctgccagtaat
acaggtgtggacaatattcgagaactgattgaaaaagctcaatttgctcccgtgcagtgt
cggtataaggtgtatgtggtggatgaatgccatatgctgagtaatcaggcgttcaatgcg
ctacttaagacccttgaagaaccaccgaaacacgttgtatttgtattagcaacaactgac
ccccaaagagtcctaccgacgattatttctcgctgtcagaggtttgattttcggcggatt
cctctggatgccatggtgcaacatttgcgggcgatcgccgacaaggaaaatatcagcatc
aaccaggaagcgattaccctggtagcacaaatttcccaaggtgggttacgggatgcggaa
agtttgctcgatcaattgggtttgttaaccgcagaagtcacacccgatcaggtttgggat
ttagttggctctgtgagtgagcgagatttattaatgttggtgcaggcgatcgccagtaac
aatgctgaaattgtccttgactccacccgtaaaatcctggataggggacgagaaccccta
gttatcttacaaaacctggcatctttctaccgcgacttactaattgccaaaaccgcaccc
acccgcagcgacttagtaccctgcacctcagaaacctggcaagccatggtaagctttgcc
caacaactcgacaccacaaatatactagtcggacaacaacacctcagaaccagcgaaatc
caactcaaaaataccacccaaccccgtctgtggctagaagtcaccctcctcggtttactc
ccctccgctaccccccaacctgttagctatcaaccagcaccccaacaagcaccccaacct
gttagctatcaaccagcaccccaacaagcaccccaacctgttagctatcaaccagcaccc
caacaagcaccccaacctgttaactctcaaccagcaccccaacaagcaccccaacctgtt
agctatcaacaagcaccccaacctgttagctatcaaccagcaccccaacaagcaccccca
cctgttaactctcaaccagcaccccaacaagcaccccaacctgttagctatcaaccagca
ccccaacaagcaccccaacctgttagctatcaaccagcaccccaacaagcacccccacct
gctaactctcaaccagcaccccaacaactaccccaacctgttaacccagtctcctttgat
acatccctagaagaaatatggcaacaagttctcaatgccttaccagtaccacccaaagca
ttactcaaggagcatgggcgcttattaagcatcagtgaaacctcagccaccgtgggggta
ccaccgaaattagtcaagctggcacagggcaaaatacccgatgtggaagccgcattttgg
cgtactagtcagaaaaaaattaaggtgagttttgttgctaaccaagcagtcaataattct
gcccccgcaactcagccaaatccggtaaattcagttgctcccacacctctagaaacaggg
caaaacccacccaccgcacatcacacacccgcacctacctacgaaccaacgccagtagtt
gaacaatatccttcagtacagccagtagtacagcccgtcgtacaaccagtcgtacagccc
gtcatacaaccagttgcccaaccagtcgccagctatgccaaacctgaaccagttgccgct
ccgtctgccttgcataccacaccaccaccgactgcgaattgggaaccagatgaactggaa
atagctgcccaacgattggcacatttttttgatggggaaattattgattttagtgatgat
attcaagtagggaagcagatagctcctaatgattttacggaagagattgagattgatgtg
gatttttag
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