Calothrix sp. 336/3: IJ00_11740
Help
Entry
IJ00_11740 CDS
T03937
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IJ00_11740 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calh03019
]
IJ00_11740 (groEL)
03110 Chaperones and folding catalysts [BR:
calh03110
]
IJ00_11740 (groEL)
03029 Mitochondrial biogenesis [BR:
calh03029
]
IJ00_11740 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
calh04147
]
IJ00_11740 (groEL)
Enzymes [BR:
calh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IJ00_11740 (groEL)
Messenger RNA biogenesis [BR:
calh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IJ00_11740 (groEL)
Chaperones and folding catalysts [BR:
calh03110
]
Heat shock proteins
HSP60 / Chaperonin
IJ00_11740 (groEL)
Mitochondrial biogenesis [BR:
calh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IJ00_11740 (groEL)
Exosome [BR:
calh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IJ00_11740 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
IJ00_11740 (groEL)
Exosomal proteins of breast cancer cells
IJ00_11740 (groEL)
Exosomal proteins of colorectal cancer cells
IJ00_11740 (groEL)
Exosomal proteins of bladder cancer cells
IJ00_11740 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKG21842
UniProt:
A0A0T7BRW8
LinkDB
All DBs
Position
complement(2777019..2778656)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKRIIYNENARRALERGMDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDHVENTGVALIRQAASKTNDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGID
KATGFLVEKIASHARQVEDSKAIAQVGAISAGNDDEVGAMIAQAMEKVGKEGVISLEEGK
SMTTELEITEGMRFDKGYISPYFATDTERMEAIFDEPYILLTDKKIALVQDLVPILEQVA
RSGRPLIILAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAVLTGGQLI
TEDAGLKLDNTKLDMLGKARRITITKDNTTIVAEGNDQAVKARCEQIRRQMDETESSYDK
EKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APELETWANANLSGEELIGALIVARALPAPLKRIAENAGQNGAVIAERVKEKEFNVGYNA
ANNEFVDMFAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDNAPAGAGAGMG
GDFDY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgaattatttacaacgaaaatgcccgtcgcgctctagagcgtggtatggat
atcctggctgaagcagttgctgtcaccctaggtcctaagggtcgtaacgtggttctagag
aagaaatttggcgcacctcaaatcgtgaatgatggtgtgaccattgcgaaggaaatcgaa
ttagaagaccacgttgagaatactggtgtagctttaattcgtcaagctgcttccaaaact
aacgacgctgcgggtgatggtaccaccaccgcgactgttttggctcacgctgtagttaaa
gaaggactacgtaacgtggctgctggtgctaacgctattctgttgaagcgtggtattgac
aaagctactggtttcttggttgagaaaatcgcatcccatgcgcgtcaagtagaagattcc
aaggcgatcgctcaagttggtgccatctctgctggtaacgatgatgaagtgggagcaatg
attgcccaagctatggaaaaagtgggcaaagaaggtgtaatttccttggaagaaggtaag
tctatgactaccgaattggaaattaccgaaggtatgcgcttcgacaagggttatatctcc
ccctacttcgctactgacacagagcggatggaagcgatttttgatgagccttacattctt
ttaactgataagaaaattgctctggttcaagatttagtacccattctggagcaagttgct
cgttctggtcgtcctttgattattttggctgaggacatcgagaaagaagcgttagctacc
ctagttgttaaccgtttacgtggcgtattgaacgttgctgcggttaaagctcctggattt
ggcgatcgccgcaaagcgatgttggaagatattgctgttcttaccggtggtcaactaatt
accgaagatgctggtttaaagcttgacaacaccaagctcgatatgctaggtaaagcccgc
cgtattaccatcaccaaagacaacaccaccattgttgctgaaggtaacgaccaagcggtg
aaagcacgttgcgaacaaattcgccgtcaaatggacgaaaccgaatcttcctacgataag
gaaaaactccaagagcgtttggctaaattgtccggtggtgtagcagtcgtgaaagttggt
gctgctaccgaaactgaaatgaaagacaagaaactgcgcttggaagacgcaatcaacgcg
acaaaagctgctgtggaagaaggtattgttcccggtggtggtacaaccttagctcacctc
gctcctgagttggaaacctgggcaaatgctaacctgtctggtgaagagttgattggtgcg
ttaatcgttgctcgtgcattacctgctcctctgaagagaattgcagaaaatgcaggtcaa
aacggtgcagttatcgctgaacgtgtcaaagagaaagagtttaacgttggttacaacgct
gctaacaacgaatttgttgatatgttcgctgctggtatcgttgatcccgcgaaggtaact
cgttccgcactccaaaacgctgcttccatcgctggtatggtgttaacaactgagtgtatc
gttgttgacaagccagagcctaaggataatgctcctgctggcgctggtgctggtatgggt
ggagactttgactactaa
DBGET
integrated database retrieval system
