Calothrix sp. 336/3: IJ00_15910
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Entry
IJ00_15910 CDS
T03937
Name
(GenBank) hypothetical protein
KO
K07506
AraC family transcriptional regulator
Organism
calh
Calothrix sp. 336/3
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
calh03000
]
IJ00_15910
Transcription factors [BR:
calh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IJ00_15910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF7347
Menorin_N
SPATA6
Motif
Other DBs
NCBI-ProteinID:
AKG24673
LinkDB
All DBs
Position
3800302..3801024
Genome browser
AA seq
240 aa
AA seq
DB search
MSNSEPITLQRNVDGQVQTIDALPTGDFGLYPATLRQSVQSYQEAEAIHLFLAPTLLDRT
ATELDLKDRIVLEPKLSSGVDPVIQHIAIALKTSLEIDGTTTHLYADAMANALSVHLITR
YSTHRTTLRQPQGGLSKQQLKQVIGHIQDALDQEISLAELAQLVRLSPYHFSRLFKQSTG
LSPHRYHIRCRIDHAKQLLMNRTMPLSEIAIAVGFSSQGHLNYHFKRWVGVTPMAFLREK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atcagcaatagcgaacccattacattacaacgaaatgtcgatgggcaagttcagactatt
gatgctctgccgactggagacttcggcttataccctgctactttacgccaatcggttcag
tcgtatcaagaagcagaagccattcacctctttttggctcccaccttactagatcgcaca
gcaaccgagcttgatcttaaagacaggattgtcctagaacccaagctatcttctggcgtt
gatcccgtaatccagcacatagcgatcgcactcaaaacctcactagaaattgatggcacc
acaacccatctctacgctgatgcgatggcaaatgccctatctgtgcatctaatcacccgt
tactcaacccacagaaccactctgaggcaacctcaaggtgggctttctaagcagcaactc
aagcaagttataggtcatatccaggatgcactcgatcaagaaatcagcctcgctgaactt
gcccaattagttcgattgagtccttatcacttttcccgactcttcaaacagtccactggt
ctttcaccgcaccggtaccatattcgctgtcgcatcgatcacgctaaacaactcttaatg
aatcgcaccatgcccctgtcggaaatcgccatagccgttggcttttcgagtcaaggacat
ctcaattatcatttcaaacgctgggtaggagtcaccccgatggcatttctccgcgaaaaa
tag
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integrated database retrieval system
