Calothrix sp. 336/3: IJ00_18040
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Entry
IJ00_18040 CDS
T03937
Name
(GenBank) ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
calh
Calothrix sp. 336/3
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IJ00_18040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
calh03019
]
IJ00_18040
03009 Ribosome biogenesis [BR:
calh03009
]
IJ00_18040
03036 Chromosome and associated proteins [BR:
calh03036
]
IJ00_18040
Enzymes [BR:
calh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IJ00_18040
Messenger RNA biogenesis [BR:
calh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IJ00_18040
Ribosome biogenesis [BR:
calh03009
]
Eukaryotic type
90S particles
RNase
IJ00_18040
Prokaryotic type
rRNA processing factors
IJ00_18040
Chromosome and associated proteins [BR:
calh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IJ00_18040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AKG22923
LinkDB
All DBs
Position
4343998..4344717
Genome browser
AA seq
239 aa
AA seq
DB search
MTIAYPRRQRQLESLVKKFGLGADAPIQWQLLDLALTHPTVSESANYEQLEFVGDAVVRL
VAAIVLWENYPDCPVGDFAAIRSVLVSDRILAQLARSYGLELYLLVAGSATADRVGQQSR
LADAFEAVLGALYLSTNNLELIRSWLDPHFKQLAAEIRLDPARLNYKAALQEWTQANFKV
LPEYRVVETNQPQHNQERFIAQVWLHGRQLGEGKGRSIKAAEQAAAKVAFLSLNSQDKH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcctacccccgtcgtcaacgtcagctagaaagtttagtcaaaaagtttggt
ttaggggcagatgcaccgattcagtggcagctgctagatctagctttaactcatcccact
gtctctgagtctgctaattatgaacagttagagtttgtgggggatgcggtggtgcgatta
gtagcggcaattgtgctgtgggaaaattatcctgattgccccgtgggggattttgcggca
attcgttcggtattagttagcgatcgcattcttgcccaacttgcccgttcctacggttta
gaactatatctattagtggcgggtagtgcgacggcagatcgagttggtcaacagtcccgt
ttggctgatgcttttgaagctgtactgggcgctctctatcttagtaccaataatttagaa
ctaattcgttcttggttagacccccactttaaacaattggcagcagaaattcgtctcgat
ccagccagacttaattacaaagccgctcttcaagaatggacacaagcgaattttaaggtt
ttaccggaatatcgagttgtggaaaccaatcaaccccaacataaccaagaacgttttatt
gctcaagtttggctccatggacgacaattgggcgaaggtaagggacgctctatcaaagcc
gcagagcaagcagccgcaaaagtggcttttctatccttaaattctcaggataaacactga
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