Calothrix sp. 336/3: IJ00_18120
Help
Entry
IJ00_18120 CDS
T03937
Name
(GenBank) radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh00860
Porphyrin metabolism
calh01100
Metabolic pathways
calh01110
Biosynthesis of secondary metabolites
calh01240
Biosynthesis of cofactors
Module
calh_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IJ00_18120
Enzymes [BR:
calh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
IJ00_18120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
AKG22937
UniProt:
A0A0T7BV62
LinkDB
All DBs
Position
4363978..4365414
Genome browser
AA seq
478 aa
AA seq
DB search
MIQIADRQTVFMERARSRVADFQRLQAAGLICKDGDFFPSVHYPPITMYQPITQEELFAG
YSVPEDGLLDIYAHIPFCRQRCIFCHYPVQLGERSAEKDQYLDALEKEMDIYMNVLGLQQ
IKARSVLVGGGTPSYLALDQIDRFLNSFVQRVDLSACRQFNYDVDPVTLIGAEGTERLRL
MKSYGVNRLTIGVQSLNPSTLKLMNRHHGVEEALASIENAKSMGYQVNIEFIFGYPGQTL
ENWIEVIEQAVKLDVDEIQLYRLKIEAYGDFQGPIKRMTERQPDELPTVEETLMMKQLAI
EILNENGYHENLRRVFTKERKQYSHYAHNQCCMLYDQVGFGLTAFSSLRDRFALNTQDFD
EYYSKIAEGKLPLNRGILRTPEEQMRWAIVLPLKNRTVRKANYEKQTGVSLNKVFRNKIE
KLKAFGLITEDEKEIGVTKLGAFFADEVAQQFHHPDYMPYPRDAYNHGLLYPYDDCEP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaattgccgatcgccagactgtattcatggaaagggcacgcagcagagttgcg
gatttccaacgtctgcaagccgcagggctaatctgcaaagatggagacttttttccgtca
gtgcattacccaccgattacgatgtatcaacccatcacccaagaggaattatttgcaggc
tattctgttccagaagacgggttgttagatatctatgcacatattcctttttgtcgccaa
cgctgtatattttgtcactatcccgtacagttaggtgagcgcagtgctgagaaagaccag
tatctcgatgcactggaaaaagaaatggatatttacatgaatgtcctgggattgcagcaa
attaaagcacgctcagttctagtcggtggtggaacaccttcctaccttgccttagatcaa
attgatcgcttcttaaattcctttgtgcagcgtgttgacttgtcagcctgtcggcaattt
aactatgacgtagatcctgtaaccttaattggtgctgaaggaacagagcgtctacgctta
atgaaatcctacggtgtcaatcgtttgacaattggagttcaatccttaaatcccagcact
ctcaaactgatgaaccgtcatcatggtgtggaagaggctttagcatcaattgagaatgct
aagtccatgggataccaggtgaatattgagtttatttttggctatccagggcaaacttta
gaaaactggattgaggtgattgaacaagcggtgaaactagatgtggatgaaatccaactt
tatcgcctcaaaatcgaagcatacggtgatttccaaggaccgattaagcgaatgacggaa
agacaaccggatgaattgccgacggtggaagaaactttgatgatgaaacaattggcgatc
gagattctcaatgaaaatggctatcacgagaatctacgtcgggtatttaccaaggagcgt
aagcaatattcccactatgcccataaccaatgttgtatgttatacgaccaagtaggattt
gggttgacagcttttagtagtttgcgcgatcgctttgccttaaacacccaagactttgat
gaatactactccaaaatcgctgaaggtaaactacccctgaatcgaggtattctcagaact
ccagaagagcaaatgcgctgggctatagttctacccctcaaaaatcgtactgtccgcaag
gcaaactacgaaaaacagacgggagtctctttaaataaagttttccgtaacaagattgag
aagctcaaagcttttggcttaattacagaagatgagaaagaaattggtgtgacaaaatta
ggagcattttttgctgatgaggttgcccagcaattccatcatccagattatatgccatat
ccacgggatgcctataaccatggcttactatatccctatgatgattgtgaaccgtaa
DBGET
integrated database retrieval system