Calothrix sp. 336/3: IJ00_18140
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Entry
IJ00_18140 CDS
T03937
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh03030
DNA replication
calh03430
Mismatch repair
calh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IJ00_18140
03430 Mismatch repair
IJ00_18140
03440 Homologous recombination
IJ00_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calh03032
]
IJ00_18140
03400 DNA repair and recombination proteins [BR:
calh03400
]
IJ00_18140
Enzymes [BR:
calh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IJ00_18140
DNA replication proteins [BR:
calh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IJ00_18140
DNA repair and recombination proteins [BR:
calh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IJ00_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
FH3_FHOD1-3
RNase_3_N
Motif
Other DBs
NCBI-ProteinID:
AKG22941
UniProt:
A0A0T7BV29
LinkDB
All DBs
Position
complement(4368785..4369774)
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AA seq
329 aa
AA seq
DB search
MPIYVYWGEDEFAIEKAVAGLRDRLLDPLWISFNYSIHPPEQADAVIDGLNQAMTPPFGA
GGRLVWLVNTTLCQSCSENILSELNRTLSVIPATSCLLLTSRNKPDERLKSTKLLKQHAQ
EYREFPVIPPWKIELITQAVQQAAQSINLKLTANAVELLAEAVGNDTRLLDNELAKLQLY
AGGNQQPLDVDRVALLIRNSQHNSLQLAAAIRTGDTAKALSILTELITACEPGIKIVATL
IGQFRTWLWVKMMMESGERNSQAIAQAAEIGNPKRIYFLQQEIKSLSVQQLIQCLPLLLE
LEVSLKQGATELPTLQTKIIELCQVCSWR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttatgtttactggggtgaggatgaatttgccatagagaaagccgtggcagga
ttgcgcgatcgccttctcgatcctctatggataagttttaattacagtatccatcctccc
gaacaagctgatgccgttattgatggcttaaatcaggcaatgacaccgccttttggagct
ggtgggcgtttggtatggttggtaaatacgacattgtgtcaaagttgctcagaaaacatc
ctatctgaactcaaccgtaccctctccgtaattcccgcaacatcctgcttgctgcttact
agtcgcaataagcccgatgagcgattgaaatcaactaagcttctcaagcaacatgctcag
gaatatcgagaattccctgtgattcctccctggaaaatagaactcattacccaagcagta
cagcaagcagcacagagtattaacttaaaattaactgctaatgcggtggaactcttagct
gaggctgtaggtaacgatactcgcctcttagataacgaactggcaaaattacagttatat
gctgggggaaatcagcaacccctagatgtggatagagttgccctgttgattaggaatagc
caacacaatagtttacaattagcagcagccattagaactggggatacagctaaagcatta
agtattttgacggagttaattactgcctgtgaaccaggtatcaagattgtcgctactctc
atcggtcagttccgtacttggttatgggtgaaaatgatgatggaaagcggtgagcgaaat
tcccaggcgatcgcccaagcagcagaaatcggcaaccccaaacgcatatattttttgcag
caagagataaaatctctatccgtgcagcaattaatccagtgcttacccctattactagaa
ttagaagtgagcctcaaacaaggtgctacagaattacccacactacaaactaaaatcatt
gaactttgtcaagtttgttcttggcgttaa
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