Calothrix sp. 336/3: IJ00_19445
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Entry
IJ00_19445 CDS
T03937
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IJ00_19445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calh03400
]
IJ00_19445
Enzymes [BR:
calh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IJ00_19445
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IJ00_19445
DNA repair and recombination proteins [BR:
calh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IJ00_19445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AKG23157
UniProt:
A0A0T7BVT9
LinkDB
All DBs
Position
complement(4685307..4686170)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVETVRRGLNQLTLNQEITGGDVLLHRTVAYPFSTEDFIAGIQGQAIATWQRYGK
YLLAELHTPKNSTNSYLGVHLRMTGQLLWLHSDEPLHKHTRVRIFLGQNQELRFVDQRTF
GQMWWVPPKIEVKTVVTGLAKLACDPFAPEFTVDYLAEKLANRRRPIKTALLDQSVVAGL
GNIYADEALFLSGILPDTLCINLQRSQIARLHPIIIQVLETSIAAGGTTFSNFLNVQGVN
GNYGGVAWVYNRTGEPCRVCHTPIQRIKLAGRSSHFCPQCQSHSPIG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaggtagaaacagtacgtcggggattgaatcagttaaccctaaac
caagaaattaccggtggagatgtgctgttacatcgcactgttgcctatcccttttccaca
gaagattttattgcaggaattcaaggtcaggcgatcgccacatggcagcgttacggaaaa
tatcttctggcagaacttcatacccctaaaaactctacaaattcctatctgggtgtgcat
ctgcggatgactggtcaattattatggttacactctgatgaacctctgcataaacatacg
cgggtgagaatatttttgggacagaatcaagaattacgctttgtcgatcagcgaactttt
ggacaaatgtggtgggttcctcccaagatagaagtcaagacagtggttacaggtttagcg
aaacttgcttgcgatcccttcgctccagaattcactgtagactacctggcagagaaatta
gccaaccgtcgtcgtcccatcaaaacagcactcctagaccaatcagtagtggcaggatta
ggaaatatttatgctgatgaagccctattcctgagtggaattctaccggatactctctgt
ataaatttacagcgatcgcaaatcgcacgcctccacccaataattattcaagttctggaa
acaagtatcgcagctggcggaactaccttcagtaattttctgaatgttcaaggtgtgaat
ggtaactatgggggcgttgcttgggtttacaaccgcacaggagaaccctgccgcgtttgc
catactcccattcagcgtatcaagttagcagggcgttccagtcacttctgtccccaatgt
caaagccattccccaatagggtga
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