Calothrix sp. 336/3: IJ00_22555
Help
Entry
IJ00_22555 CDS
T03937
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh00470
D-Amino acid metabolism
calh00550
Peptidoglycan biosynthesis
calh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IJ00_22555 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IJ00_22555 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
calh01011
]
IJ00_22555 (murD)
Enzymes [BR:
calh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
IJ00_22555 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
calh01011
]
Precursor biosynthesis
Amino acid ligase
IJ00_22555 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
GT-D-like
Motif
Other DBs
NCBI-ProteinID:
AKG23696
LinkDB
All DBs
Position
complement(5412082..5413461)
Genome browser
AA seq
459 aa
AA seq
DB search
MSKAHIIGLGKSGVAAARLLKRDGWEVMLSDSNTSENLLNQQKELATEDITVQLSYSLKL
GGEDTPKLIVVSPGVPWDIPVLVQARELGIETIGEMELAWRHLQDVPWVAITGTNGKTTT
TALIAAIFQTAGLNAPACGNIGYAACEVALGEKPGEKPQWVIGEISSYQIESSSSLAPRI
GIWTTFTPDHLARHKTLENYYSIKAQLLQRSQLQIINGDDPYLRQVGLEDWGNALWTSVQ
GKEYLVGDRGFYIQDGWVWESLGTGEDTAIVESHSLRMVGEHNLQNLLMSVAAARLAGIN
KEAIAKGIREFPGVPHRLEHICTWQGIDFINDSKATNYDAAEVGLNAVTSPVILIAGGEA
KAGNDTAWLSKIKEKTAAVLLIGNAAPQFAQRLEAEGYSNYEVVGNMANAVPRAGELAKE
SQSSVVLLSPACASFDQYPNFEARGDDFRQLCLMHFSAE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagctcatataattggattgggaaagtccggtgtcgcggcggcaagattgttg
aaacgggatggttgggaggtgatgctgagtgatagtaacacctccgaaaacctcctaaat
caacaaaaagaactcgctacggaagatatcaccgtccaactcagttattccctgaagtta
ggtggtgaagacacaccaaaattaatcgttgtcagtcccggtgtcccctgggatatccca
gtgttagtacaagcaagggaactagggattgaaaccatcggggaaatggaattagcatgg
cgacatttacaagatgttccctgggtggcgattacgggtacaaatggtaaaacgactact
actgctctgattgccgcaatatttcaaactgctggattgaatgctcctgcctgcggtaat
atcggctatgcagcctgtgaggttgccctaggtgaaaagcctggtgaaaagccacagtgg
gtgattggagaaattagcagttaccaaattgagtcttcctcttccttagctcctcgtatt
ggaatttggacaaccttcacccctgaccacctcgcacgacacaaaactttagaaaattac
tacagtatcaaagcccaactcttgcagcgatcgcaactgcaaattatcaatggtgatgat
ccatacctgcgtcaggtgggtttagaagattggggaaatgctttgtggacaagtgttcag
ggtaaagaatatttagttggcgatcgcggtttttatattcaggatggttgggtatgggaa
tccttaggaaccggggaagatacagcgatcgttgaaagccatagcttacggatggtggga
gaacacaatttacaaaacctcctcatgtccgttgctgctgctcgactagcaggaattaac
aaagaagcaattgccaaaggaattcgtgagtttcccggtgttccccaccgcttagagcat
atctgcacttggcagggaatagattttattaatgatagcaaggcaactaactacgacgcg
gcagaagttggtttaaatgcagtgacaagtccggtaattctgattgctgggggagaagct
aaggcaggaaatgatacagcttggctcagtaaaattaaggaaaaaaccgccgccgtccta
ttgattgggaatgctgcacctcaatttgcccaaaggttagaggcagaaggatacagcaac
tacgaggttgtaggaaatatggcaaatgccgttcctcgtgctggagaactggcaaaagaa
tcccagtcatccgtagttttactgtcacctgcttgtgccagctttgaccaataccccaac
ttcgaggcacggggtgatgatttccggcaactgtgtttaatgcatttttctgctgaatag
DBGET
integrated database retrieval system
