Calothrix sp. 336/3: IJ00_26055
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Entry
IJ00_26055 CDS
T03937
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
calh
Calothrix sp. 336/3
Pathway
calh03030
DNA replication
calh03430
Mismatch repair
calh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IJ00_26055
03430 Mismatch repair
IJ00_26055
03440 Homologous recombination
IJ00_26055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calh03032
]
IJ00_26055
03400 DNA repair and recombination proteins [BR:
calh03400
]
IJ00_26055
Enzymes [BR:
calh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IJ00_26055
DNA replication proteins [BR:
calh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IJ00_26055
DNA repair and recombination proteins [BR:
calh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IJ00_26055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
AKG24319
LinkDB
All DBs
Position
complement(6235701..6238340)
Genome browser
AA seq
879 aa
AA seq
DB search
MSFVPLHIHSDYSLLDGASQLPALVDRAIELGIKAIAITDHGVMYGAIELIKICRSKNVK
PIIGNEMYLINGDIGKQERRPRYHQVVLAKNTQGYKNLVKLTTTSHLEGVQGKGIFSRPC
INKDLLKQYSEGLIVTSACLGGEVPQAILSGRVDAARKVAKWYKDIFGDDYYLEIQDHGS
QEDRIVNVEIIKIAQELDIKFIATNDSHYTSCYDVEAHDALLCIQTGKKVFEENRMRYSG
TEYLKSADEMRMLFRDHLPEDIIESAINTTLEVAEKIEPYSIMGEPRIPNYPIPPGHTAD
TYVEEVSWDGLLQKLNRKSRHEIDSTYKERLEYELKMIQQMGFSTYFLVVWDYIKFARDN
NIPVGPGRGSAAGSLVAYTMGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEQRDKV
IDYVTQKYGKERVAQIITFNRLTSKSVLKDVARVLDIPYGESDKMAKLIPVSRGKPAKLK
VMISDDTPEAEFKERYDNDPKVRHWVDMAMRIEGTNKTFGVHAAGVVISADPLDEIVPLQ
KNNDGSVITQYFMEDLESLGLLKMDFLGLRNLTMIQKTIDLIEKNPKHGFKLDPYEITSQ
ERKAQKILAKGEYANLPKDVQATYRLLEKGELEGVFQLESSGMRQIVRDLKPSNIEDISS
ILALYRPGPLDAGLIPKFINRKHGREEIEYEHSLLESILNETYGIMVYQEQIMKIAQDLA
GYSLGQADLLRRAMGKKKVSEMQKQQEKFIDGSTKNGVKKQIAEKLFDDMLKFAEYCLSY
DTEIFTVEYGFLPIGEIVEKRLECTVLTVDNHGNIYSQPIAQWHHRGQQQIYEYGLEDGS
VIRATKDHKFMTTDGQMLPIDEIFERGLDLLQVTNLDNI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtgcctttacatatccatagtgattatagtttgctagatggtgcttcccaa
ttacccgctttggtggatcgagcaattgaactgggaattaaggcgatcgccatcacagat
catggtgtcatgtatggggcgatcgaactgataaaaatctgtcgtagcaaaaatgtcaaa
cccataattggcaacgaaatgtatttaattaacggagacattggtaaacaagaacgtcgt
ccccgttaccatcaagttgtcctcgctaaaaatactcagggctacaaaaatctagttaaa
ttaactacaacatctcacttagagggtgtccaaggtaaaggtattttttcccgtccttgc
attaataaagacctacttaaacagtatagcgaaggattaattgtcactagtgcttgtttg
ggtggtgaagttccccaagcaattctgagtggtagggttgatgctgcgaggaaagttgca
aaatggtataaagatatttttggagatgactattatttagaaattcaagaccacggttcc
caggaagatagaattgtcaatgtcgaaattataaaaattgcccaagaattagatattaaa
tttattgccaccaacgattcccattatacatcttgctatgacgtagaagcccacgacgca
ttactttgtattcaaacaggaaagaaggtatttgaagaaaatcggatgcgttatagcggt
acggaatatttaaaatctgctgatgaaatgcggatgttatttcgtgaccatttaccagaa
gatattatcgaatcggcaattaatacgaccttagaagttgccgaaaaaatcgaaccctat
agtattatgggggaaccaagaatacccaattaccctattcccccaggtcatacagcagat
acttatgtggaagaggtttcctgggacggactattacaaaaactcaatcgtaaatcccgt
catgaaatcgattctacctacaaagaaaggctagaatatgaattaaaaatgattcagcaa
atgggattttccacctactttttagttgtgtgggactacatcaaatttgctcgtgacaat
aatattcctgtgggtcccggtcgaggttccgcagcaggttccctagttgcttataccatg
ggaattactaatattgaccccgtacaccacggtttattatttgaaagatttctcaacccc
gaacgtaaatcaatgccagatattgatacagatttctgtattgagcaacgggataaagtg
attgattatgtcacacaaaaatatggcaaagaacgggttgcccaaattattactttcaac
cgtttaacatcgaaatcagtcctcaaagatgtggcgcgggtattagatattccctacggg
gaatcagataaaatggcgaaattaattcccgtttcacggggtaaacctgccaaattaaag
gtgatgatttccgatgataccccagaagcagaatttaaggaaagatacgataatgaccct
aaggtacgtcactgggtagatatggcaatgcgcattgaaggaacaaataaaaccttcggt
gttcatgctgcgggtgtggtaatttctgctgaccccttggatgaaattgttcccttacag
aaaaataatgatggttctgtaattactcaatattttatggaggatttagaatccttaggt
ttgttgaaaatggactttttgggattaagaaatctcaccatgattcaaaaaaccatcgat
ttaattgaaaagaatcctaagcatggttttaaacttgacccctacgaaattaccagtcag
gaaagaaaagcacaaaaaattctagcgaagggggaatatgcaaatttaccgaaggatgtg
caagctacctatcgattattagaaaagggtgaattagagggagtctttcaactagaatct
tccgggatgcggcaaattgtgcgagatttgaaaccctcaaacattgaagatatttcttcc
attctcgctctctatcgaccaggacccctggatgcaggtttgattcctaaatttattaat
agaaaacatggtcgggaagagattgagtatgagcatagtttactcgaatctattttgaat
gaaacctatgggattatggtttatcaagagcaaattatgaaaattgctcaagatttggct
ggttattccctaggacaagctgatttgctgcgtcgagcaatgggtaaaaagaaagtttcg
gagatgcagaaacagcaggaaaaatttattgatggttcgacaaaaaatggtgtgaaaaaa
cagattgccgaaaaattattcgacgatatgttgaagtttgcggaatactgcttgagctat
gatacagaaatttttaccgtagaatatgggtttttacctattggtgaaattgtcgaaaag
cgtctggaatgtacggtgttaactgtagataatcatggtaatatctatagtcaacccatt
gcccaatggcatcatcgtggacagcagcaaatctatgagtatggtttagaagatggtagt
gtgattcgggcaactaaagaccataaatttatgactaccgacggacaaatgttaccgatt
gatgagatatttgagcgcggtttagatttattacaggtgactaacttggataatatttaa
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