Candidatus Contubernalis alkaliaceticus: HUE98_00035
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Entry
HUE98_00035 CDS
T07972
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calk03032
]
HUE98_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_00035 (gyrA)
Enzymes [BR:
calk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUE98_00035 (gyrA)
DNA replication proteins [BR:
calk03032
]
Prokaryotic type
DNA Topoisomerases
HUE98_00035 (gyrA)
DNA repair and recombination proteins [BR:
calk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUE98_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CENPH
Motif
Other DBs
NCBI-ProteinID:
UNC90618
LinkDB
All DBs
Position
6898..9387
Genome browser
AA seq
829 aa
AA seq
DB search
MDEYTHGKIVNINIQDEVKNSFMDYAMSVIVSRALPDVRDGLKPVHRRILYAMHELGLNP
DKPHKKSARLVGEVLGKYHPHGDVAVYEAMVRMAQDFSSRYPLADGHGNFGSVDGDSAAA
MRYTEVRMAKIAEQMLIDIDKDTIDYRPNFDDSLEEPVVLPARFPNLLVNGSSGIAVGMA
TNIPPHNLGEVIDGLISIIDDPDVDGTALSKIIKGPDFPTGGLILGQGGIESAYRTGRGI
IKMRAKTTIEPLKGDKTRITVTELPYQVNKARLVETIADLVRTKKIEGITDLGDESDRTG
MRVIIDLRKDVIPQVILNKLFKYTQLEQTFGVIMLALVDGQPRVLSLRQVLKEYLKHQKE
VVTRRTRFDLRKAEARAHILEGLRIALSNLDAVIKLIRQSKTVDEARKGLISNFKLTEKQ
AQAILDMRLQKLTGLEREKLEAEYLELIKKIAYLQEVLNNERLIFQIIRTELLEVKKKFS
DPRRTKIMPREEELHVEDLIAVEDAVITLTHQGYIKRLPLTTYRSQRRGGRGITGMGTKD
DDFVEQIFITSTHHNLLCISNHGKLYRLKVYEIPEAGRQAKGTNMINLLSLDRGEFITTV
IPIRKFTKEDFLFFGTKKGYVKKTRLIEYQRARKGGLIALTLESDDELIGARMTDGSREI
LLATTRGLSIRFQESDVRTMGRAARGVKGITLSPEDLVIGMQVVCPERDILVVSEKGFGK
RTAVEEYRLQKRGGKGIYTLKVTPRTGPLVGFRGVQSGDELMLITANGIIIRQQISEISM
ISRYAQGVTLIKLDTGDRVVSLARVPAKSGGAEMVSPESISPNQRENGV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtacacccacggaaaaattgtaaatattaatattcaggatgaagtgaaaaac
tcttttatggattacgccatgagtgttattgtcagccgggcactgccggatgtcagggat
ggtctaaaaccggtgcatcgtagaatattatacgctatgcatgaattgggccttaatcct
gacaagccccataaaaaatctgccaggctggtgggagaagttttgggtaaataccatccc
catggagatgttgcggtttatgaagctatggtgagaatggcccaggatttttcttcccga
tatcctcttgcggatggacacggtaacttcggaagcgtggatggtgattctgctgcggcc
atgcgttatacggaggttaggatggctaaaatagcagaacagatgctcatcgatatagat
aaggataccatagattatcggcctaattttgatgacagcctggaggagccggttgtgctg
cccgctagatttcctaatctactggtaaatggatcttcaggaattgctgtaggtatggct
actaatattccaccccataatttgggagaggtaatagatggtctaataagcataatcgat
gatcccgatgtagatggaaccgctttgtccaagattattaagggcccggattttcccacc
gggggtttgattctgggtcaaggaggcattgaatctgcttaccgtaccggtaggggtatt
attaaaatgagggctaaaactaccattgagccgctgaagggggataaaaccaggataacg
gtgacggaacttccctatcaagtaaacaaggcccgtctggtagaaactattgctgatttg
gttagaaccaaaaaaattgagggaattacagatctgggggatgaatccgatcgcaccggc
atgagggtgattattgaccttaggaaggatgttatacctcaggttattttaaataagctt
tttaaatatacccaactggaacagacttttggggtgattatgctggctctggtagacggt
cagccccgggtgctttctctaaggcaggtgttaaaagagtatctaaaacaccaaaaagag
gttgtaacccggcgtaccaggtttgatttacggaaagcagaagccagggctcatatcctg
gagggactgcgcattgctcttagcaatttagatgcagtgattaaactaatcaggcagtcc
aaaacggtggatgaagccagaaaaggattgatcagtaattttaaattaacggaaaaacag
gctcaggctattttggacatgcgcttacaaaagctaaccggtttagaacgggaaaagctg
gaggcagaatacctggagctgattaaaaagattgcttacctacaggaagttttaaataat
gaaaggcttatattccagattattaggactgaattactagaagtaaagaagaaattttct
gacccccggaggacgaaaataatgcctcgggaggaagaacttcatgtggaagacttaatt
gctgtggaggacgcagtgatcactcttacacatcagggttatataaagcggctgcctttg
actacctatcgtagtcaaagaagagggggccggggaattaccggaatggggaccaaagat
gatgattttgtagaacaaatattcatcacttctacccatcacaacctgttgtgtatcagt
aatcatggaaaactttatcgtcttaaagtatacgagattcctgaggcgggaaggcaggcc
aagggaacaaatatgatcaatctgctgtctctggacaggggtgaatttatcaccacagtt
attcctatacggaaatttactaaagaagactttttattctttggtaccaaaaaaggttat
gttaaaaagacccgcttaattgaatatcaaagagcccgcaagggggggctcattgctctt
accctggaaagtgatgatgaactgatcggagcaaggatgaccgacggtagtcgggaaata
cttttagctactactaggggtttgagtataagatttcaggaaagtgatgtcaggaccatg
gggagagctgcccggggagttaaaggaatcactctttccccggaagatttagttattgga
atgcaggtggtctgtccggaacgggatatactggtggtgtcggaaaaaggttttggaaag
agaaccgcagtggaggaataccggctgcagaaaaggggaggcaaaggaatatacaccttg
aaagttaccccacgcaccggtcctttggtaggtttcaggggggtacaatctggagatgag
ttgatgttaataactgccaacggaattattattcggcagcagattagtgaaatttccatg
attagccgttatgcccagggagttacattgattaagttagatacaggggatcgtgttgtt
tccctggcccgggttccggcaaagagcgggggcgctgaaatggttagccccgaaagtatt
agtccaaaccaacgggaaaacggagtataa
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