Candidatus Contubernalis alkaliaceticus: HUE98_00110
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Entry
HUE98_00110 CDS
T07972
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUE98_00110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_00110
Enzymes [BR:
calk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HUE98_00110
DNA repair and recombination proteins [BR:
calk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUE98_00110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UNC93734
LinkDB
All DBs
Position
26529..27095
Genome browser
AA seq
188 aa
AA seq
DB search
MSKTQALELWQEKVSGCRRCALWESCSRVVFGEGNPEAQLMLVGEAPGREEDKLGRPFVG
RAGKLLDSILEMAGFSRPEVYIANVVKCRPPNNRNPLPEEIKACLPYLQGQINIIGPKIV
VCLGAMASKTLIYPKAQISKIRGKWVNQESFRIMPTFHPAYLLRDPQKKKLVQQDFQEVE
REYKAVTE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atttctaagactcaagcccttgagctgtggcaggaaaaggtttcaggctgtagaaggtgt
gctttatgggagagctgcagccgggtggtctttggggagggtaatccggaagcacagttg
atgctggtgggggaggcccctggaagagaagaggacaagctggggaggccctttgtggga
cgagccggcaaacttttggacagtattctggagatggcagggttttcaaggccagaggtt
tatattgccaatgtggttaaatgcagaccacccaataatcgaaaccctctgcctgaggag
ataaaggcttgtcttccttatttacagggacaaataaatattattggtcccaaaattgtt
gtgtgcctgggggctatggcctccaaaacgttaatttaccccaaggctcagattagtaag
attcgaggtaagtgggtgaatcaggaaagttttaggataatgcccacctttcatcctgca
tatctgcttagagatcctcaaaaaaagaagttggtgcagcaggattttcaggaggtagaa
agagaatataaagctgtaacagaataa
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