Candidatus Contubernalis alkaliaceticus: HUE98_02050
Help
Entry
HUE98_02050 CDS
T07972
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calk03016
]
HUE98_02050 (truA)
Enzymes [BR:
calk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HUE98_02050 (truA)
Transfer RNA biogenesis [BR:
calk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HUE98_02050 (truA)
Prokaryotic type
HUE98_02050 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UNC90968
LinkDB
All DBs
Position
418116..418850
Genome browser
AA seq
244 aa
AA seq
DB search
MLNVKLTLAYDGTLYHGFQRQRNAISIQEVLERALHRVYGDVTPVTGSGRTDSGVHARGQ
VANYYAPFEIPIDRISYALNSLLPGDIRVLTAEIVSKEFHARFDARSKIYSYLVDQAEFH
SVMNRLYSYHLPGPLDVSSMDQASKYFLGKHNFSAFCSSKSCVKNKEREIKKAFWEEEGH
MLRFVIEADGFLYNMVRIIVGTLLETGKGRMSPRDVSLIITSGHRQAAGPTVPARGLCLE
KVYY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatgtgaaacttaccctggcctatgacggtaccctctaccatggattccaaagg
cagagaaacgccataagtattcaggaggttttagagagagcccttcatagagtctatggt
gatgttactccagtaactggatctggaaggaccgactccggagttcatgcccggggtcaa
gtggcaaattactatgctccctttgaaattcccatagaccgaatttcctatgctctaaat
tctctgcttccaggtgatatcagggtcttaacggcggaaattgtttcaaaagaatttcat
gctcggtttgatgccaggagtaaaatatattcatatcttgtagatcaggcagaatttcat
tcagtaatgaatcgtctttattcatatcatctgccaggacccttggatgtcagtagtatg
gaccaggcttcgaaatattttttggggaaacataatttttcagctttttgttcatctaaa
agctgtgtaaaaaataaagagagagaaataaaaaaagctttttgggaagaggaaggccat
atgctgcgttttgttattgaagcggatggatttctctataatatggtcagaattattgtc
ggaacccttttggaaacaggtaagggtagaatgagtccccgggatgtttctttaattatt
acctcggggcacaggcaggcagctggtcccacagtgccggccagagggctttgtttagaa
aaagtatactattag
DBGET
integrated database retrieval system
