Candidatus Contubernalis alkaliaceticus: HUE98_02530
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Entry
HUE98_02530 CDS
T07972
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
calk
Candidatus Contubernalis alkaliaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_02530
DNA repair and recombination proteins [BR:
calk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUE98_02530
Archaeal homologous recombinant proteins
HUE98_02530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
UNC91058
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All DBs
Position
528509..529855
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AA seq
448 aa
AA seq
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MPVSIIHCGDIHLGFNQYNNEERFHDFHRSFAYIVNYAIENKVDYFIVTGDFFNRRSINP
RTLSQAISELSKLKEKNIQVIVVEGNHDKAPYGEGAESWLHFLNEQGYLYLLSPRFEEGS
LVLESYKEKQGGNLVSFPGVRFVGLGYQGSMTSRRVNELNEQLEKSEDPTILMLHSAVDM
LMHLGGIKNEDIAILKDKIDYVAMGHIHHRYELEDWIYNPGCPECWDVGEGAKEKGFYHV
VLEEGEIKVSHIPGVRRPVHSCAVNVTGCEEVKDVYNLCDKEIDKLDVMKGSNPIVQLVI
KGSTPFSPLSIDTKLLEDRIKNAHDCLIVEVVNNTVMKGEQEALTDNPAEMNREDLEREV
LRQIFLNNGGLNLWADEMVDISKQIKELIHNEAADQSISVLVENLAEKIVAEEVKEQTIT
QEKVQQESEVAAALESNYNEEVKWDENI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgttagtatcattcattgcggagatattcatttaggatttaaccaatataataat
gaagaaaggtttcatgactttcaccgctcttttgcatacatagtgaattatgctattgaa
aacaaagtagattattttattgtaaccggggattttttcaacaggcgcagtataaatccc
agaactttaagtcaggccatttctgaacttagcaagctaaaagaaaagaatatacaggtc
attgtcgttgaaggaaaccatgataaggccccttatggtgaaggagctgaatcatggctg
cattttctaaatgaacaagggtacctttacctgttaagcccacgctttgaggagggttcc
ctggttttggaatcatataaggaaaagcagggaggaaatttagtatcctttccaggggta
agatttgtgggccttggctatcagggctcaatgaccagccgcagggtgaatgaacttaat
gagcaattggaaaagtcagaagatccaaccattcttatgttacattcagccgttgatatg
ctgatgcatcttggagggataaaaaacgaggatattgctattttaaaagataaaattgat
tatgtagctatgggccatattcatcaccgctatgaacttgaggactggatttataacccg
ggctgtcctgagtgctgggatgtgggagaaggagctaaggaaaaaggcttttaccatgta
gttttagaagagggagagataaaagtctcccatatacctggtgtaagacgccccgttcat
tcctgtgccgttaatgtcaccggttgtgaagaggtgaaagatgtttataacctttgtgat
aaggagatagataaattagacgttatgaaaggttctaatcccatagtccaattggttatt
aaaggctccactccttttagccccctttctattgataccaaattattagaagatagaata
aaaaatgcacatgactgtcttattgtggaagtagttaataacactgtgatgaaaggagag
caggaggctttgactgataaccctgctgaaatgaatcgagaagacctggaacgagaagtt
ttgcgtcaaatctttttaaacaatggtggactaaatctttgggcggatgagatggtggat
atttccaagcagattaaagaacttatacataatgaggcagcagatcaatccatttcagtc
ctggttgaaaatttggcagaaaaaattgtagcagaagaagtaaaggaacaaaccataaca
caagaaaaagtacagcaggagagtgaagtggctgctgccctggagtccaattacaatgag
gaagtgaaatgggatgaaaatatttga
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