Candidatus Contubernalis alkaliaceticus: HUE98_03380
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Entry
HUE98_03380 CDS
T07972
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUE98_03380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calk02000
]
HUE98_03380
Transporters [BR:
calk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HUE98_03380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Fervidolysin_SD2
Motif
Other DBs
NCBI-ProteinID:
UNC91214
LinkDB
All DBs
Position
705937..707754
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AA seq
605 aa
AA seq
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MKIKKCFQALLIVVLLFSFIVTGCSPGETPEGQKDTQEEQAGVPRDDIKNPDTFIQATLS
GAETLDLHFMSSAATSGISLNVYDSLLASKKGEDLEPSLSTIVPSTENNLINVQNDGKTT
IEFPIREGVKFHNGEILTPEDVKYTFMRGIIVGSLSNLTIALLGEGSYKDLVEKVGSDEA
FNKLDSSISINDDSVIFLLDEPYGPFLDLMADNGAHFGILNKSWCIEHGAWSGTKETVDD
FISITLEENSLHDKMMGTGPFEFKTWEIGERVILERFEDYWQGPAKINRAIRQVVSDTNT
AILLLQKGDIDFINLELPDLQQVEGYEGIKVIKEMPTSQLIKINFNFDIHGSKYVGSGEL
GPNGIPRDFFSDIDVRKAFSYAFDYDTFIDEVLLGAGIKPYGPVLVGHLTANPDNLQYDF
DLEKAEKHFKKAFNGELWDKGFKLTVPFNEGSNQRQRALEILQLNLKQINPNFQLEITSL
PWPAYVGEINDREMPLSQFGILPRYEHPHFSLAYHMYSRGYYAPIKGYVELAEERYDELV
EELGRSFDDERVKEISHELQRRSSEDALSIFHYQVIGNVAMRDWVQGYEESPFPFIINYH
SISKE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaaagtgttttcaagcattgttaatcgtagtactgttatttagttttata
gtgacaggttgttcaccgggcgaaacaccggaaggacaaaaggacactcaagaggaacaa
gcaggtgttccaagggatgatattaaaaatcctgatacatttattcaggctactctaagc
ggcgccgaaacgttggatcttcattttatgtccagtgcagcaaccagcggaatttctctt
aatgtttacgattcactgttagcgagtaagaaaggggaagatttagagccgtcattatct
actattgttcccagcacagaaaacaacctaattaatgttcaaaatgatggaaaaacgacc
atagaatttcctatcagggaaggtgttaagtttcataacggggaaattcttacaccggaa
gatgttaaatacacattcatgcgtggtattattgtgggttctctttctaacttaacaata
gctttgcttggggaaggatcttataaggatttagttgaaaaggttggctctgatgaagct
tttaataagcttgattctagtatcagcataaatgatgattcagtaatttttcttttagat
gaaccttacggccctttcctggatttaatggctgataatggtgcgcattttggaatatta
aataaaagttggtgcattgaacatggagcctggtccggcacgaaagaaacagtagatgat
tttatttccattactttagaagaaaattcgttacatgataaaatgatgggaacggggccc
tttgaatttaaaacttgggaaattggagaaagagttatcttggaaaggtttgaggattac
tggcagggtccagctaaaataaatcgtgcaatcagacaggtagtctcagataccaacact
gcaattctcctattacaaaaaggagacattgactttattaatctcgaacttccggacctt
caacaagtagaaggatatgaaggtataaaagttattaaggaaatgcctacctcacaatta
attaaaataaattttaactttgacatacatggaagtaaatatgtggggagcggagaatta
ggaccaaacggtatccctagagattttttcagtgatatcgatgtaagaaaagctttctca
tatgcttttgattacgatacatttattgatgaagtattactgggagcgggaattaagcct
tatggaccggttttggtgggacatctaaccgctaatcctgataaccttcaatatgatttt
gatttagagaaagctgaaaaacatttcaaaaaagcatttaatggagaattatgggacaaa
ggttttaaacttacggtacctttcaatgagggttctaatcagcggcagcgtgctcttgaa
attctccagttgaatttaaagcaaatcaacccaaattttcaattagaaataacatcctta
ccttggcctgcatatgtcggagagattaatgacagggagatgcccctttcacagtttggc
atactacccaggtatgagcatccacatttctcactagcttatcatatgtattcaagaggt
tattatgctcctattaaaggatatgttgaattagctgaagagagatatgatgaattagta
gaagagctgggcaggtcttttgatgatgagagggtaaaagaaatctctcatgaactgcaa
agacgttcttctgaagatgccctttcaatttttcattatcaagttatcggaaatgttgcc
atgagggattgggttcaagggtatgaagaaagtcctttcccgtttattatcaattaccat
agcatatcaaaagaatag
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