Candidatus Contubernalis alkalaceticus: HUE98_04140
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Entry
HUE98_04140 CDS
T07972
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
calk
Candidatus Contubernalis alkalaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
calk03000
]
HUE98_04140
Transcription factors [BR:
calk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
HUE98_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_DeoR
HTH_5
Rrf2
HTH_24
HTH_7
Longin_2
HTH_41
TrmB
HTH_23
HTH_36
RPA_C
Motif
Other DBs
NCBI-ProteinID:
UNC91350
LinkDB
All DBs
Position
847700..848401
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AA seq
233 aa
AA seq
DB search
MRKTPVYVQIAEKIKNKINTGQLETGDAIDSENEICREFNVSRMTVRKSLAILINEGYIY
SIPGKGNYVKKPEFSKYVVQYDEMKNSINSVDRTKLLEVNIVKPDDKLADKLRISKNKNV
IMIRRIFYTEGEPVAYDIKFLVYYRGMPIVEKEIQYATFPEMVSKKTPLFSMKKEILISV
EAADEEKKRYLNIYNDVPLLVVEQKFTDQENKPLGVGITYFRGDYIKLWGESL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacacctgtttatgtgcaaattgcagaaaaaattaaaaataaaataaataca
gggcagttagaaaccggggatgccatcgactcagaaaatgaaatttgccgggagtttaat
gtcagccggatgaccgtaagaaaaagcctggcaattcttattaatgagggttatatttat
tcaataccaggaaaaggaaactatgtgaagaaacctgagttttctaagtatgttgttcaa
tatgatgagatgaagaacagcataaacagtgtggaccgtaccaaattattagaagtaaat
atagtaaaacccgatgataagctggcagataagcttcggatatcaaaaaataaaaatgtt
attatgatacgaagaattttttataccgagggggagcctgtagcatacgatataaaattc
ctggtttactaccgcggtatgcctattgtggaaaaggagattcagtatgcaactttcccg
gagatggtttcaaagaaaacaccattattttcaatgaaaaaagagatattaatttctgtt
gaagctgccgatgaagaaaaaaaacgttatttaaatatatataatgatgtccctttgctg
gtggttgagcagaagtttaccgatcaagaaaataagcctctgggggttggtattacatat
ttcaggggcgactatattaagctttggggagaaagcctgtaa
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