Candidatus Contubernalis alkaliaceticus: HUE98_04340
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Entry
HUE98_04340 CDS
T07972
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUE98_04340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calk02000
]
HUE98_04340
Transporters [BR:
calk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HUE98_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
UNC91384
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All DBs
Position
898793..900097
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AA seq
434 aa
AA seq
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MEPITIGLIGILAFFVLLILKMPISYAMSLVGFVGLGYLVSPSAAFRVVAKDIYSTFASY
SLSVIPMFVFMGFLAFHSGIGSRLYAFAYKMVGHLSGGLAIATQATCALFGAVCGSNTAT
AATIGAIALPEMKKYNYDPSLSTASVAAGGALGVLIPPSVIFIIYGISTEQSIGQLFIAG
IIPGLMLMCLYMLTIFLLALRNPQLAPVGPRFSWSERFGALKGGLWEVMVIFLISLGGLF
KGWFTPTEAGAVGAFGVLALTVLSRKLKLEGFQKALADSTRTTAMIMLLVAGAVIFGRFM
AMSRIPFELASWAGALPLPPSLVMAIILLIYLVLGFFIDALALILLTIPIFYPVAVTTLG
YDPLWFGVIIVMVVAMGVITPPVGMNVYIIKGVAKDVPLEVIFKGIWPFLLALIICIALL
IIFPSLATFLPGFI
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaataactataggattaattggaatattggctttttttgtacttttgatatta
aagatgcccatttcttatgctatgtccctggtaggatttgtggggttgggatatctggtc
tctccttcggcagcatttcgagtggtggccaaagatatctattccacctttgcttcttat
tctctgagtgttatacctatgtttgtttttatgggttttctggcttttcactcaggtatt
gggtccaggctttatgcattcgcttataaaatggtaggacacctgtccgggggattggcc
atagctacccaggcaacctgtgctctttttggtgcggtgtgtggttccaatacggcaact
gccgctaccattggggcaatagccttaccagaaatgaaaaaatataattatgatccttct
ctgtccactgccagcgtggccgctggtggggccctgggggtattaattcctcccagcgta
atctttattatctatggaatatctacggaacagtccatcggtcagctttttattgctggt
atcatccccggtcttatgctgatgtgtttgtatatgctgaccattttcctgctggccctt
cgaaatccccagctggcccctgtcggtcctcggtttagctggagtgaaaggtttggtgct
cttaaggggggcttgtgggaggttatggtaatatttttaatttctttggggggcctcttt
aaaggatggtttactcccacggaagcgggggcggtaggagcttttggtgtattggccctt
actgttctgagcagaaaattaaagctcgagggctttcaaaaagcattggctgattctacc
cgcaccactgctatgattatgctgctggtggctggagctgttatttttggtcgttttatg
gccatgagcaggatcccctttgaactggccagttgggccggagcattacctctgccccct
tcattggtaatggctatcattttactgatatacctggtgttgggattttttattgatgct
ctggctttgatattgttgactatccccatcttctatccggtagcggtaaccaccctgggg
tatgacccactgtggtttggggtgattattgtaatggtagtggccatgggtgttattact
ccgccggtggggatgaatgtttatataatcaagggggttgccaaggatgttcccctggag
gttatttttaaggggatttggcctttccttttggctttaattatatgtattgccctattg
attatctttccatctctagccacctttcttcctggttttatataa
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