Candidatus Contubernalis alkaliaceticus: HUE98_05560
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Entry
HUE98_05560 CDS
T07972
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUE98_05560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calk02000
]
HUE98_05560
Transporters [BR:
calk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HUE98_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UNC91601
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All DBs
Position
1166011..1167603
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AA seq
530 aa
AA seq
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MARKFIFLLLALVIVLSIFGCAPVESPQGQLRVASLGSPNTLNPLFIRDNYSFEVVSLLH
ANLFTFNHETLEAEPALVEQWSVEEEGTVYILQLRDDVKWSDGEPLTAEDVAFTLRVICH
PDFTGYHYALYFNVITGSRDYHLNHDSPLAEGSIKGIEVIDDITLKITLDQVMAPFLTYL
DLFPLPAHVLGDVPVAQMEGHDYSLNPEITAGPYILNDWAVDEYLHFVYNPNYYLGQPGI
DEIYYRIIPNQEAQLIDLKGGNLDLIPTAVKIEDVEDLKEDSNINIYSNLRLVYDYLGFN
MANPESPLYTKEVRQALSMVLDREAVVRDLLLGYGRVAHGPLAPLHFPFDENFTSYSVDI
QKARQLLDESGYGDGFELKLIVNAGNEVRENTALMFKEAADAIGVEVTIQVLEWQTYMEL
AMQGDFDVIISGQGTGIDPDLISIWHSQSPLNELGYVNHQVDTVIQEAQVSMDREERSRM
YRSAQEMIVEDAPMVWLYYREALHAASEGLRNFAPHPEITFYKVHQWEIE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttggctagaaaatttatttttctgctgttggccctggtgatagtgctcagtatttttgga
tgtgctccggtagaatctccacagggacagctgcgggtggcttctctaggcagccctaac
acattaaatccgctgtttattagggataattattcttttgaagtagtttccctgctgcac
gcaaacctgtttacctttaatcatgaaacattagaggcagagccggccctggtggaacaa
tggtctgtggaagaggaagggacggtatatattttacaattaagagatgatgtaaaatgg
tctgatggtgagccattaacagctgaagatgttgccttcactcttagggtgatatgtcac
ccggacttcaccggatatcattatgccctgtattttaatgtaataaccggttcccgggat
tatcacttaaatcacgacagtcctttagcggagggaagtattaaaggcatagaggtaatt
gatgatattacattaaaaataacgttggatcaggtaatggctccatttttaacttatctg
gatttatttccccttccagctcatgttttgggggatgtcccggtagctcaaatggaaggt
catgattacagtctcaatcctgaaataactgctggaccctatattttaaatgattgggca
gttgatgagtatttgcattttgtgtacaatcctaattattatttaggacagccgggaatt
gatgaaatttattacaggataatacccaaccaggaggcacagcttattgatctaaagggt
ggaaacctggacttgattcctacagctgttaaaatagaagacgtagaagatttaaaagag
gattcaaacattaatatttattccaacttgagattggtttatgattatttgggatttaat
atggctaatcctgaaagccctctgtacacaaaagaggtgagacaggccttgtctatggtt
ttggatagggaagctgtggttagagatttactgctgggttacgggagggtagcccatggg
cctctggcaccgctgcattttcccttcgatgaaaacttcacatcttattctgtggatata
caaaaagcccggcagctgctggatgaatccggttatggtgatggatttgagctaaagctc
atagtcaatgccggtaatgaagtaagggaaaatactgccttgatgtttaaggaggcggca
gatgccattggtgtggaggttacaattcaagtcttggaatggcagacttacatggaatta
gccatgcagggagattttgatgtaataatttctggacagggtacaggtattgatcccgac
ttaatttccatctggcacagtcaaagccctcttaacgaactggggtatgtaaaccaccag
gtggacactgttatccaggaagcgcaggtgtcaatggacagggaggaaaggtcccggatg
taccgtagtgctcaagagatgattgtagaagatgctcctatggtgtggctttattacaga
gaggccctgcatgcagcgtcagagggtctgcgtaattttgccccgcatcctgaaattact
ttttataaggtgcatcagtgggagatagaataa
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