Candidatus Contubernalis alkaliaceticus: HUE98_06630
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Entry
HUE98_06630 CDS
T07972
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_06630 (addB)
Enzymes [BR:
calk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUE98_06630 (addB)
DNA repair and recombination proteins [BR:
calk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HUE98_06630 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
UNC91797
LinkDB
All DBs
Position
1348196..1351711
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AA seq
1171 aa
AA seq
DB search
MKGKNKLSLVLGRAGTGKSRFCLEEVRHKLKENPIGEPLIYIVPDQVVFQFEHALASTPG
LEGIIRAQVLSFRRLAWKVMQEVGGGALQYIDDFGKGLMIRKILENHKEDLRVLKLAGEK
AGTIAKMVEFYNQLKRSRVTLRLFEQHSRCHDKFKDLAFIFLKLEKKLAGLYQDSEDFLE
LLACSLNHSSYLSNAEIWVDDFYEFTNQEYKVLEGLLTKGLEVTVTLCLDKNYSSKEKIE
ELSPFYPTALTCRKLNEMVERVGVNAKAIILKSGQMTRFSQRPQLMHLEKNLTLTFPKPY
EGKAEDSVGILTAVNRRWEIEHIAGQMIILARDKGYRWRDMSIMAPDLESYKDIISTVFR
EYDIPFFLEHKRTVLHHPLIEFVRSALEVVCFNWNYDAVFRCIKTELLLPPEEERLQGKN
WQEHMWQLENYVLAFGISSDQWQSDKPWDYLQGGALEEEKEKVTEEQEHYLNMINMAKEV
IREPLVRFQRNVENAVKVSAKIKALQQLLQEIQAVHRLERWSQKSLEEGKPEKAREHLQV
CKALSGLLDQMEEIMAEDNVTSAIFLNMLETGFESMRLGLEPSSLDQVLIGDLERTRPGN
IKIAFIPGANEGTLPSRPKEDGIITEQERELLIDSGVDLAPGSLRRLFDKQFLIYTVLTR
ASESLWLSYPLADEEGNALLPSPLVERLKEMIPSIQEIFETGNRDLVLSDIVHPGSSLNS
LARQLKCWQKGQKLHPNWWGIYNWYIDKEEWRGPVKYILSGLAYKNRENPLRLEVARDLY
GKGLKASISRLEKYRACPFAHFIQYGLRLEERKMYRLEVPDIGQLFHGALLSFGGRVQEE
GLTWGELSPEKCVELAEEEVEKLAPRLQKEVLFSTARYRYLIKKLKDTMGRTAVILGKHA
KVSSFDPVALELSFGVKGVLPPVIFKLPDGFQVVMGGRIDRVDLARREDGTAYVRIIDYK
SGRPELNLAEIYHGLSLQLMVYMDVVLTYARDWLGVEAEPAGILYFYVHAPLIKTNKILK
PKEIEKMIIQRYKMKGKVLAELEAVTLMDHSLNSPGYSDIIPAAVKKQGGFYKGSQTMDA
LSFDRFRQHVRQKLTEASWGISQGRVDIKPIQIGKKKACRFCAYKAVCQFDLRLEENCFE
VLNRWPDEEVELMLENGQIPKGGSQYEDRQG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggaaaaataaattaagcttggttttgggcagggccggtaccggaaaaagtcgg
ttttgcctggaggaagtacgtcataagctaaaggaaaatccaataggagaaccgttaatt
tatattgttccggatcaggtggtttttcaatttgagcatgctttggcttcgacaccggga
ttggagggaataatcagggcacaggttttaagttttcgccgtctggcctggaaggttatg
caggaggtgggaggaggcgctctccaatacatagatgatttcggaaaaggcctgatgatt
agaaagatactggaaaatcataaagaagatttaagggtgctaaagctggccggggaaaaa
gcaggaactatagccaaaatggttgagttttataaccagttgaaacgatccagggtaaca
ttacggctttttgaacagcattcccggtgccatgataagtttaaagacctggcattcata
tttttgaaattggaaaaaaaactagccgggttataccaagattctgaagattttctggaa
cttctggcctgcagccttaatcattccagttatctttccaatgcagaaatttgggtagat
gatttttacgaatttaccaatcaggaatataaagtgttggaaggtttgctgacaaaaggc
ctggaggttaccgttaccctttgcctggacaagaattattcttccaaggaaaaaattgag
gaactaagccctttttaccctaccgccttaacctgtcggaagttgaatgaaatggttgaa
agggtgggggttaatgcaaaggctatcattttaaaatccggtcaaatgactcgtttcagc
caacgccctcaactaatgcatttagaaaagaatcttaccctaactttcccaaaaccctac
gaaggaaaagcagaggactcggttggcattttaactgctgtaaaccgtcgctgggagata
gaacatattgccgggcagatgattattttagcccgggataaagggtatcgctggcgggat
atgagtataatggcccctgacctggagagttataaagatattatttctacagtttttaga
gagtatgacattccatttttcctggaacataaaagaactgtactgcatcaccccttgatt
gagtttgtccgctccgccctggaagtagtttgttttaactggaattatgacgctgtcttc
cgatgtataaaaacggagctgctccttcccccggaagaagagaggcttcaaggtaaaaat
tggcaggagcatatgtggcagctggagaattatgtgcttgcctttggtatatctagtgac
caatggcagtcggataagccctgggattaccttcaggggggggctctagaggaggagaaa
gagaaagtaactgaggagcaagaacattatttaaatatgatcaatatggctaaggaggta
ataagagagcccttggttcgttttcaaagaaacgttgaaaatgctgtaaaggtttctgca
aaaataaaagcccttcagcagctgctgcaggagatacaggctgtgcatcgcctggagaga
tggagtcaaaaatctttagaggaagggaagccagaaaaagctagggaacatctgcaggtt
tgcaaggctctgtcagggcttttggaccagatggaggaaattatggcagaggataacgtt
acatcggctatttttttgaatatgttggaaaccggttttgaaagcatgaggctgggcctt
gagccttcttcgttggatcaggtgcttatcggcgatctggagaggactcgtccaggtaat
ataaaaattgcctttatccccggggccaacgaaggaactctaccctcccggccgaaagaa
gatggtattattacggagcaggagagagaattattaattgattccggggtagacctggcc
ccgggaagcctccggcgcctgtttgataagcaatttttgatatatacagtgttaacccgg
gcatcagagagtttgtggttaagttatcccctggccgatgaggaagggaatgctcttttg
ccctcacccctggtggagcgtttaaaagagatgattcccagtatacaggaaatatttgag
acaggaaatagagatcttgttttgtcagatattgttcatcctggaagcagtctaaattcc
ctggcacgtcaattaaaatgctggcaaaaaggccagaaactgcacccgaactggtgggga
atttacaactggtatatagataaggaagagtggagagggccggtaaaatatatactgtcg
gggttggcatacaaaaaccgggagaaccccttgaggttagaggttgcccgggatctttac
ggaaaagggcttaaggccagtatttcccgccttgaaaaataccgggcctgtccctttgct
cattttatacagtatgggttgaggcttgaggaaagaaaaatgtatcgtctggaagttccc
gatatcggacagttattccatggggcgcttttgagttttgggggaagggtccaagaagag
ggattaacttggggagaactttccccggaaaaatgtgttgaattagcagaggaagaggta
gaaaagttggctcccaggcttcaaaaagaagtgctttttagtacagcccgttatcgttat
ttaattaaaaaattaaaggatacaatgggtaggaccgcagtgattttagggaaacatgct
aaagtgagcagttttgatcctgtggctttagaactgtctttcggggtaaaaggggtgctt
cctccggtaatatttaagctgcctgacggttttcaagtggtaatggggggaagaattgac
cgggttgacctggcccggcgtgaagacggcactgcttatgtgaggattatagattataaa
tccggtcgtccagaactaaacctggcggaaatatatcacggcctttcccttcagcttatg
gtatacatggatgtagtcttgacctatgcccgggattggttgggagtagaggctgaacct
gcggggatattatacttttatgtacatgctccactgataaaaacaaataaaatcctcaag
cctaaagaaattgaaaaaatgattatccaacgctataaaatgaaagggaaagtgctggcg
gagttggaggcagttacgcttatggaccacagtctaaattcaccgggttattcagacatt
attcccgctgcggtaaaaaaacaagggggtttttataagggttctcaaaccatggatgct
ctctcatttgataggtttagacagcatgtgcggcaaaagttgacagaagcctcctggggc
atttcccagggaagagtggatattaagccaatacagatagggaagaaaaaagcctgcagg
ttttgtgcatataaggcggtatgccagtttgaccttcggctggaggaaaactgttttgaa
gtcctaaacaggtggccggatgaagaggtagagcttatgctggagaatggacaaatccca
aagggaggatctcaatatgaagaccggcaaggataa
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