Candidatus Contubernalis alkaliaceticus: HUE98_06860
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Entry
HUE98_06860 CDS
T07972
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calk03016
]
HUE98_06860 (truB)
Enzymes [BR:
calk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HUE98_06860 (truB)
Transfer RNA biogenesis [BR:
calk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HUE98_06860 (truB)
Prokaryotic type
HUE98_06860 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UNC91840
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All DBs
Position
1400424..1401326
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AA seq
300 aa
AA seq
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MEGYINFLKAPGNTSHQCVAFFRKMLGMKKIGHAGTLDPGAAGVLPICLGKGTKAADYLL
ESSKIYRAELYLGVTTDTQDAYGKITGGSCFKDISEERVREIFGEFRGKITQVPPMYSAV
KHKGKPLYKLARQGEVIPRKAREVMIYSLEILDINLPRVLFQVECSKGTYVRTLAVDIGE
RLGTGAYLSFLLRVKSGPFMIEESYTQEELEVKMGEGNIQQCILPLDYAYGHFPDAVLKE
EALIPFINGVPQPLTGLKNYSLWDKILRVYSPEGTFLALGEWQTGCSQPMLKPKKIFRQG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatattaattttcttaaagcccccggtaatacctctcatcaatgtgtagct
ttttttagaaaaatgttgggtatgaaaaaaattggacacgccggaacccttgaccctggt
gctgccggggttttaccaatttgtttagggaaggggacaaaagcggctgattatctcctg
gaatcctctaaaatttaccgggctgagctgtatttgggggtaaccacagatacccaggat
gcttacggaaaaattactggaggttcatgttttaaagatataagtgaggaacgggtaagg
gaaatctttggtgaattcagggggaaaattactcaggttccacctatgtactctgcagtt
aagcataaggggaagcctctctataaattggcccgccagggagaagttatcccccgtaag
gcccgggaggttatgatttactccctggagatattagacattaatctgcccagggtatta
tttcaggtagaatgttctaaagggacatatgtaaggactctggctgttgacattggagaa
aggctgggaactggagcttatctctcttttttactaagagttaaatcgggaccctttatg
atagaagaatcttatactcaagaagaattggaagtaaaaatgggggaaggaaatatccaa
cagtgcatacttcccctggattacgcctatgggcattttcctgatgctgttctgaaggag
gaggccttaattccttttattaatggtgtacctcagcctcttacaggcttgaaaaattat
tcgctttgggataaaatattaagggtttattctcctgaaggtacctttttagccctgggg
gaatggcagacaggctgcagtcaaccgatgctcaaaccgaaaaaaatcttcaggcagggt
tga
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