Candidatus Contubernalis alkaliaceticus: HUE98_08955
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Entry
HUE98_08955 CDS
T07972
Name
(GenBank) PocR ligand-binding domain-containing protein
Organism
calk
Candidatus Contubernalis alkaliaceticus
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Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_18
HTH_AraC
CTD4
HTH_Crp_2
L27_1
Motif
Other DBs
NCBI-ProteinID:
UNC92205
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Position
complement(1786938..1788206)
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AA seq
422 aa
AA seq
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MSLLRTTQGINEVEYLDKFLGSFCSATGLYAEAVTLNGDTLYAPEGLSRCQFCQIVRSGP
GGVKQCRASYKRAATEASKWEEPYFFRCHAGLVIWAIPIIIRGEALGAIMCGQVLLWEPD
DYFWQEQQFFNSKHDQFEKLILAVRKLEVVTPARTQAAADLLFVVVNHIVERNVRVLEDA
DQARKVQQEIRQEMERKKRDPKDKNLSYEAYLEKERELLRCIRLGDRTNAEIILSGLFAD
LFTKAKGKANEINQRTFELVCLVSRAAIEGGVDADRAMEVLKEYNKELKKVGDIFYQAKK
TIEHYLDGIFALTNKKHINTVKKAREYIMENCSQSLTTQDIATHIYISPSHLSRLFRKEL
DCTVLEYLTRVRIEKALQLLKNNEQSIEEVARSVGFKNTSYFARIFKERVGVTPLTFRNS
LF
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagtttactaaggacaacgcaaggtataaatgaagtagaatatcttgacaagtttttg
gggagcttttgcagtgctactggtctgtatgccgaggctgtaacgctaaatggagatacc
ctttacgccccggaagggctgtcccgctgtcagttctgccaaattgtaaggagtggaccc
ggaggagtaaaacagtgcagagcctcttacaaaagggctgcaactgaggcctctaaatgg
gaagagccgtatttctttcgttgtcatgccggtttagttatctgggccattcccattatt
attaggggcgaagccctgggggctattatgtgcggccaggttctgttgtgggagcccgat
gattatttttggcaggagcagcagtttttcaactccaagcatgaccagttcgagaagctt
attctggccgtgcgaaagttagaggtagttactcctgcaaggactcaggcggcggcggac
ctgctatttgtagtagtaaatcatattgtggaaagaaatgtaagggttttggaggatgca
gaccaggcgagaaaagtgcagcaggagattcggcaggagatggaaaggaaaaaaagggat
cccaaagataaaaaccttagttacgaagcatacctggaaaaggaaagagaattattaagg
tgtatcaggttaggagatagaaccaatgcggaaatcatactctcgggactttttgctgac
cttttcaccaaagccaaaggaaaagcaaacgagattaatcaaaggacttttgaactggtc
tgtctggtttcccgggctgccatagagggcggtgttgatgctgacagggccatggaggtt
ttaaaggagtataataaagaattaaaaaaagtgggggatattttttaccaggcaaagaaa
accatcgaacattatcttgacggtatttttgcattaacaaacaaaaaacatataaacact
gtcaaaaaagccagggaatacattatggagaactgctcccaatcccttaccactcaggat
atagccacccacatttatatcagtccctcccatctgagtcgtttgtttagaaaggaatta
gactgcactgtgttggaatatcttaccagggtaagaattgagaaagcgctgcagctgttg
aaaaacaatgagcaaagtattgaggaagtagcccggagtgttggatttaaaaacactagc
tattttgccaggatttttaaggagcgcgtaggagttactcctttgacttttcgtaatagt
ctgttttag
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