Candidatus Contubernalis alkaliaceticus: HUE98_11080
Help
Entry
HUE98_11080 CDS
T07972
Symbol
mnmA
Name
(GenBank) tRNA 2-thiouridine(34) synthase MnmA
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HUE98_11080 (mnmA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calk03016
]
HUE98_11080 (mnmA)
Enzymes [BR:
calk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HUE98_11080 (mnmA)
Transfer RNA biogenesis [BR:
calk03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HUE98_11080 (mnmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
Asn_synthase
ATP_bind_3
QueC
NAD_synthase
DUF7411
Arginosuc_synth
GLOD4_C
DUF2125
Motif
Other DBs
NCBI-ProteinID:
UNC92595
LinkDB
All DBs
Position
complement(2204932..2206029)
Genome browser
AA seq
365 aa
AA seq
DB search
MIGKGSVAVAMSGGVDSSVTAAVLKEAGYPIFGVTMTICPSAGYHDQEGNTAAGKINNAV
EDARKVCQQLGIAHHVLDLSGDFRERVVDYFLKEYERGRTPNPCVVCNLHIKFDRLMKEA
FSLGADYLATGHYARIIYNDQRQKYFLQKARDPGKDQTYFLFSLTQDKLKKILFPLGGYL
KEEVREKARSLNLEVMEKPESQEICFIEDNDYKGFIKREGKVTFSPGPFLLTSGERIGTH
QGLPFYTVGQRKGLGLAVGYPIYVVDIDYSTNAVVVGKREELFAADLYAGEVSCVSGEPL
EQQDLTVKIRYRSPEVEAQLTPLAPGRVIISFKEPQRAVTPGQAVVFYRGEQVLGGGIIE
ERLAF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgattggaaaaggtagcgtagcggtggccatgagcggaggggtggatagttcggtaacg
gcggcagttttaaaagaagccggttatcccatatttggtgttactatgactatttgtcct
tccgcaggataccacgaccaagaaggaaataccgccgccggtaaaattaataatgcagtg
gaggatgcccgaaaggtttgtcagcagctgggcattgctcatcatgtcctggacctgtcc
ggagattttagagaaagggtggttgattactttttgaaagaatatgagcgggggaggaca
cctaacccctgtgtagtttgtaatcttcatattaaatttgaccgcttaatgaaagaagct
ttttctttgggagcagattacctggccaccggacactatgcccgcattatttacaatgac
caacggcaaaaatattttctgcagaaagcccgggatcccggcaaggaccagacttatttt
ttattcagccttacccaagataagctcaagaaaattcttttccctctgggcggttacctt
aaagaggaggtccgggaaaaggcccgaagtttgaatctggaggttatggaaaagccggag
agtcaggagatatgttttatagaagataatgactataaaggttttataaaaagagaagga
aaggttaccttcagtcctggcccttttctacttacttcaggggaaagaataggaacccat
cagggacttcctttttacaccgtggggcagcggaaaggattgggcctggcggtaggatat
cctatttatgtggtagatatagattattccacaaatgccgtagtggtgggaaaaagagaa
gagctctttgcagccgatctctatgccggggaagtaagttgtgtttccggtgaacctttg
gagcagcaggaccttacggtaaaaattcgttatcggtctccggaggtggaggcacaatta
actccattggcccccggtagggtgataatcagttttaaagaacctcaaagggcagttact
ccaggacaggcggtagttttttaccggggagaacaggtcctgggagggggaattattgaa
gagaggctggctttttag
DBGET
integrated database retrieval system
