Candidatus Contubernalis alkaliaceticus: HUE98_11355
Help
Entry
HUE98_11355 CDS
T07972
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HUE98_11355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_11355
DNA repair and recombination proteins [BR:
calk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HUE98_11355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
HrpE
DUF3993
DivIVA
Motif
Other DBs
NCBI-ProteinID:
UNC92640
LinkDB
All DBs
Position
complement(2255796..2258153)
Genome browser
AA seq
785 aa
AA seq
DB search
MEKNLQIMEFDKILAMLSSKCDTILGKELAEDLRPVSDLSIVERWQKETTEGCSLLGQIS
IRLSGVTDIRSSLVRSQRGGTLNARQLREIADNLTACKRIKKQIQEYGTGSILSMTKVIE
DFSSLEALLVRSINEEGEVTDAASVELAFVRRQKKISQVRIQRELEKFLRSSITSKYLQE
NIVTQRNDRYVVPVKIENKAQVPGIVHDQSASGATLFIEPMAVVEANNQLNQLRSSELKE
IERILVSLSVQVSHWVESIREVLNIIAELDFILSKARLSLEMDANEPLLNENGYFRMVNA
RHPLLKVEVVPISLDLGDRHRTMVMTGPNTGGKTVALKTVGLLVLMTQAGLHVPAEAGTI
IAVFDSVLADIGDEQNIEQSLSTFSGHMKNIVEILRKASANSIVLLDELGAGTDPAEGAA
LAMGILEQLHMLKVRTIATTHYSSLKSFAYDHQEMENASVEFDSLTLQPTFRVLQGVAGS
SNAFEVASRLGLEEEVIEKAKMFLGDEQLKLKKLMENLEESQRKIHQNQRSMEEERNEII
RLKRQLEQDSLFLEQRKKEIIQKAREEALLIVNQAKRKTESMIKEMGKVSREQDWKKRNE
VFQRLKEEFKNSQKQLIDEMDSMERQCQVPLENLDIGDLVFIKSMKQKGRVLELNEDSQE
VVVQVGIMKICTDFSDLKGVHDKSQLPQTLESSAAPGLLFQKTMEIKTELDLRGTTLQEA
VELVDKYFDDACLAGLGKVYLIHGKGTGALRKGLHEYLVSHNQVESFKLSEYGEGGSGVT
VVSLR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatctgcaaataatggaatttgataaaattcttgcgatgctttcttctaag
tgtgacacgatacttggaaaagaactggccgaagacctgcggccggtatcagatttaagt
attgtggagagatggcagaaagaaactacggaaggctgtagtttgttgggccaaattagt
attcgtctgtcgggagtgacagacattcgttctagtttggttcgaagtcaaaggggagga
actcttaacgccagacagctgcgggaaattgcagataatttaacggcatgtaagagaata
aaaaaacaaattcaggaatatgggaccggtagtattctgtctatgactaaggttatagag
gatttttcatcactggaagctcttcttgtccggagcattaatgaggagggggaagtgacg
gacgctgcctctgtagaacttgcttttgtccggaggcagaaaaaaatttcccaggttcga
atccaaagagagttggaaaagtttctaaggagcagtattaccagcaagtatttacaagag
aatattgttactcagcgtaatgaccggtatgtggttccggtgaagatagaaaataaagca
caggtgcctggtattgttcatgaccaatctgccagtggtgccactctttttattgaaccg
atggcagtggtggaagccaataatcaattaaatcagttgaggagcagtgaacttaaagag
attgagaggatactggtttctctcagtgttcaggtatctcactgggtagaaagcataagg
gaagtactaaacataatagctgaactagattttatcttatctaaggccaggctgagcttg
gagatggacgctaatgaaccgctgttaaatgaaaacggttattttagaatggtgaatgcc
cggcatccccttttgaaggtagaggttgtgccgatatcgctggatttgggagacaggcac
cgtactatggtaatgaccgggcctaataccggtggcaagactgttgctttgaaaacggta
ggattgttagtcttgatgactcaagcgggtcttcatgtgcccgcggaagcaggaactatt
atagctgtatttgacagtgttttggcagatattggagatgaacagaacattgaacagtct
ttgagcaccttttcgggccacatgaaaaatattgtagaaatattgcgtaaagcttcagcc
aattctatagttcttttagatgaactgggggctgggactgaccctgcggagggggccgcg
ctggctatggggatattggagcagctgcatatgttgaaagttcggactatagctacaacc
cattacagcagtctaaagagttttgcttacgaccaccaggagatggagaatgcttctgtg
gaatttgattctcttactttgcaacctactttcagagttcttcagggggtagctggaagc
agtaatgcctttgaggtggcatctcgtttgggtcttgaggaagaagtgattgagaaagcc
aaaatgtttttaggggatgaacagttaaaattaaaaaaattgatggaaaacttagaagag
agtcagagaaaaattcatcagaaccagcggtccatggaggaggaaaggaatgaaattatt
cgccttaaaaggcagctggaacaggattccttattcttggagcagagaaaaaaggaaatt
attcaaaaggccagggaagaggcacttttaattgttaatcaggcgaaaagaaaaaccgaa
agtatgattaaggaaatggggaaagtgtcccgggagcaggattggaagaaaaggaatgaa
gttttccaaagattaaaagaagaattcaagaattctcaaaaacaattgattgatgaaatg
gacagtatggagcgccagtgtcaggttcctctggagaatttagatattggagatttagtt
tttattaaaagtatgaaacaaaaagggagagtgctggagttaaatgaagatagtcaagaa
gttgttgtccaggtggggatcatgaaaatttgcactgatttttctgatttaaaaggggtt
cacgataaatcccagttgccacagactctggaaagtagtgctgctcccgggctgctgttt
caaaaaactatggagataaagactgaactggatttacgtgggactactcttcaagaggcg
gtagaattggtagataaatattttgatgacgcttgtttagctggattgggcaaggtttat
ttgattcacggtaaggggacaggggctctgcggaaaggactacatgaatatttagtttct
cataatcaggttgagtcattcaagttgagtgaatatggagaagggggcagcggggttact
gttgtgagtctgaggtaa
DBGET
integrated database retrieval system
