Candidatus Contubernalis alkaliaceticus: HUE98_12185
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Entry
HUE98_12185 CDS
T07972
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUE98_12185 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_12185 (priA)
Enzymes [BR:
calk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUE98_12185 (priA)
DNA repair and recombination proteins [BR:
calk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUE98_12185 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
AAA_16
nSTAND_NTPase5
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UNC92787
LinkDB
All DBs
Position
complement(2413789..2416026)
Genome browser
AA seq
745 aa
AA seq
DB search
MDNLYARVVVDLWAPGIGDRYFHYLIPSKYISQVREGTRVMVPFGNRKLLGFVMGFDSTP
DVDKVKEIISVVDQIPLLTRELLDLARWISSFYISPLVEVLKAILPNFYATTIKAKEITV
VKLAVSDEEAGKYAAVNRKRAPRQSRILDILLKGGEMSLKDLLNLSQAGRQSVKALQGKN
LLDLSNKRVIRGPFEDKLFGLNPRLKLNPKQEEVLTGIKNHLQRGLSGNILLHGVTGSGK
TEIYLQVIEEVVKGGKEALVLVPEISLTPQMVKWFRGRFGSLVTVLHSRLSQGERYDQWC
RIRQGEIKIVIGPRSAVFAPFSNLGIIIIDEEHETTYKQEESPRYDARDAAKRRSCFFSC
PVVLGSATPSVEAYYRAQEGEDMLLSIRDRVEKRPLPPVEVIDLKEEINRGNRTLFSKKL
YESIKITLQKKQQVILFLNRRGFATFLVCRECGYVLRCSHCSITLTYHANQELLKCHYCH
QEKGVPEACPGCGGNYIRFLGLGTQRVEKGVRDLFPQARILRMDVDATTRKGSHLDIFKT
FQRGDADILIGTQMIAKGFDFPRVTLVGVILADTALNLPDFRAGERTFQLLTQVAGRTGR
SSLGGKVIVQTFNPEHYSIMAAKKHDYQAFYQEELRLREQFQYPPYNQLVRVGFSSVSEN
NLSQKAGEFKGMLMESLKGIKAEVLGPCPCPLSKIRGRYRWHLVIKSKDFSGIHRASRQV
WEEFYKGSRNKDFRVILDINPINML
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggataatctttatgccagggtggtggtggacctatgggcaccgggaattggagacagg
tattttcattatttaatcccctcaaaatacatctcccaggtccgggagggtacccgggtt
atggtgcctttcggtaatcgaaaactgttgggttttgtgatggggtttgattccacccct
gatgtagataaagtgaaggaaattattagtgtggttgaccaaattcctttgcttacccgg
gaattgttggacctggcccgctggatttccagtttctatatcagtcccctggtggaggtt
ttaaaggcgattttacctaacttttatgcaactaccattaaggctaaggaaataactgtg
gtgaaactggcggtatcagatgaagaagccgggaagtacgcagcagtgaacaggaaacgg
gctccaaggcagtccaggattttagatatacttctaaaggggggggagatgtccctcaag
gatttgttaaacctttcccaggcagggcggcagtcggtgaaagccctccagggtaagaat
cttttagatttgagtaataagcgagttatcagggggccttttgaagacaaattgtttggt
ttaaatccgcggttgaagctgaacccaaagcaggaggaagtgttaacagggattaaaaat
catttacaaagaggcctttcgggtaatattctactgcatggggttaccggcagtggaaaa
actgaaatttatcttcaggttattgaagaggtggtcaagggggggaaggaagccctggtg
ctggtgccggaaatatccttaacccctcagatggttaaatggttcagaggaaggtttgga
tcactggtaacagtgctgcacagccgcctctcccagggagagaggtatgaccaatggtgc
cgaattaggcagggggagattaaaattgtgatagggccccgttctgctgtttttgcacct
ttctcaaatttgggtataataataatagatgaggaacatgagactacctataagcaggag
gagagtccccgctatgatgccagggatgcagccaaaaggaggagctgttttttttcctgt
ccggttgttctaggcagtgctaccccatcggtggaggcctattatagagctcaagaaggg
gaggatatgctcctgagcataagggatagggtagaaaagcgccctctgccgccggtagag
gtgattgaccttaaagaggagattaacagaggaaacaggacactcttcagcaaaaaactt
tatgaaagcataaaaataaccctgcagaaaaaacaacaggttattctatttttaaatcgt
aggggttttgctacttttttggtctgccgggagtgcggttatgtgctccgctgttctcac
tgcagcattactttgacttatcatgccaaccaagagctgttaaagtgtcattactgtcat
caggagaaaggggtgccggaggcatgccccgggtgtggaggtaattatatccgttttttg
ggtttgggtactcagagagttgaaaaaggagtcagggatttgtttccccaggccaggatt
ctgcgtatggatgtggatgctactacccgcaaaggatctcacctggatatttttaagact
tttcagcggggggatgctgatattctcataggcacgcagatgattgccaaggggtttgat
tttcctagggtaactttggtaggggtaattctagcggacaccgctttgaatttaccggat
ttccgcgcgggggaaaggacttttcaactgctgacccaggttgccggaagaaccggccgc
agttctctggggggaaaagtgattgtccagacttttaacccggaacattacagcatcatg
gcggcaaaaaaacacgattatcaggctttttatcaggaggaattacgcttacgggaacag
ttccaatatcctccctataaccagctggtaagggtaggtttttccagtgtatcagaaaat
aacttgagccaaaaggctggggagtttaaagggatgctcatggagtcccttaaaggaata
aaggcagaggtgttgggtccctgcccctgtcccctttccaaaatacggggccgttaccgc
tggcacctggttataaagagtaaagatttctcaggcatacaccgggcatccaggcaggta
tgggaggaattttataaaggttcgaggaataaagattttagagtaatactggatattaat
ccaataaatatgttgtaa
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