Candidatus Contubernalis alkaliaceticus: HUE98_14010
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Entry
HUE98_14010 CDS
T07972
Name
(GenBank) diguanylate phosphodiesterase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUE98_14010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calk02000
]
HUE98_14010
Transporters [BR:
calk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HUE98_14010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UNC93927
LinkDB
All DBs
Position
complement(2793161..2794747)
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AA seq
528 aa
AA seq
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MVIFLILSLLVGCNGDTEGDATSNEAALENGEVETPKEPVIVILEGGDAGFPSPFGHLPR
MRGTVMKYVFDSLLEPDEDQCIPWLAEKWEISEDGKTHDITIREGVKWHDGEKMTANDVV
FSFQYYLEHPPVFIGEVITQSGYIQEIEAVNDYQVKIVTSEPNSTFYCEAGMLRIIPEHI
WKDVDDPYGFTDEGSVIGCGPFILTDYSKEHGTYRYEAFEDYWGPKQRVDVIEMVPVSDE
ILAFEGGDISIARITTDLLGRFENNEEFFILESPALAGTMISFNMNKNDLFKKKEFRQAF
TYSIDKEDIIQKIQRGAAKPGSPGILPIDHQWYNSNLQKYDYNPEKALELLKEAGVEGSL
SFELLVSEGAEVRVGELLKEQLAKVNIDLTVVAVDNQSRDARANEGNYEIAILSMGAWGL
DADYLRTRYYSELEEGAGGSATGILGSDQGYVNPEVDRLCEDQLKETDREKRKQIIYNLQ
EVLAEDCPEIPLYNNYYIYVFRPDEYDGWTFMFDHAVMTHAKLSFLEK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggttatctttcttattttatctttgttggtgggttgtaatggagatactgaaggggat
gctacttcaaatgaagcggcattggaaaatggagaggttgaaacacctaaggagcctgta
atcgtaatacttgaagggggagatgctggatttccttctccctttggacatcttccccga
atgaggggtaccgttatgaaatatgtctttgattctcttttggagcctgacgaggatcag
tgtatcccctggttagcggaaaaatgggaaattagtgaggacggaaaaacccatgacatt
accataagggaaggggttaagtggcacgatggggagaaaatgacggcaaatgacgtggta
ttttccttccaatattacctggagcatcctccggtatttatcggagaggtgattacccag
tccggttatattcaagaaatagaggcggtcaacgactaccaggtaaagattgttacctct
gaacctaactcaactttttactgtgaagcaggaatgttgagaatcattccagaacatata
tggaaagatgttgatgatccttatggttttacagatgagggttcagttattggctgcgga
ccttttatattgaccgattacagcaaagagcatggcacttaccgttacgaggctttcgaa
gattactggggacctaagcagcgggttgatgtaatagaaatggtgccggtgagtgacgag
attctggcttttgaaggcggagatattagcattgccaggattactacagatcttctcggt
cgctttgaaaacaatgaagagttttttatactggaaagccccgctttggctgggaccatg
attagttttaacatgaataaaaatgatttgtttaagaaaaaagagttccggcaggctttt
acctattcaatagataaagaggatattattcaaaaaatacagcggggggcagcaaagccc
ggcagccctggaatacttcccatagaccatcaatggtataattcaaatctgcaaaaatat
gattataaccctgagaaagctttagaattattaaaagaggcaggggtagagggtagtctc
tcctttgagcttttagtatcagagggggctgaagtccgtgtgggagaactgctgaaagaa
cagctggccaaggttaatattgatttaacggtggtggctgtagacaatcagtcccgggat
gcccgggctaacgaagggaattacgaaatagctattttatccatgggcgcctgggggtta
gatgctgactatttaaggacccggtattacagtgaactggaagagggcgccggtggttca
gccacaggtatcctggggtctgatcagggatatgtaaatcctgaagtagaccggctttgt
gaggaccagctaaaggaaacggatcgtgaaaaacggaagcagattatatacaatcttcag
gaggttttggcggaagattgtccggaaattccattatataataactactatatttatgtt
ttcagacccgatgaatacgatgggtggacctttatgtttgatcatgcagtgatgacccat
gccaagttgtctttcctggaaaaatga
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