KEGG   Candidatus Contubernalis alkaliaceticus: HUE98_16625
Entry
HUE98_16625       CDS       T07972                                 
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
calk  Candidatus Contubernalis alkaliaceticus
Pathway
calk00521  Streptomycin biosynthesis
calk00523  Polyketide sugar unit biosynthesis
calk00541  Biosynthesis of various nucleotide sugars
calk01100  Metabolic pathways
calk01110  Biosynthesis of secondary metabolites
calk01250  Biosynthesis of nucleotide sugars
Module
calk_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:calk00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    HUE98_16625 (rfbD)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HUE98_16625 (rfbD)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HUE98_16625 (rfbD)
Enzymes [BR:calk01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     HUE98_16625 (rfbD)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     HUE98_16625 (rfbD)
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd 3Beta_HSD Polysacc_synt_2 NAD_binding_4 NAD_binding_10 DUF5488
Other DBs
NCBI-ProteinID: UNC93558
LinkDB
Position
complement(3358733..3360142)
AA seq 469 aa
MMVTKTNFKGLQIIETDVYGDNRGWFTESYTKSKFVEHGIDIDFIQDNQSYSAQKGTLRG
IHFQNNPKAQTKIIRCTRGAIIDTVVDLRKGSDTYKQWFSIELSAENKTQLLVPKGFGHA
FLTITDDVEVQYKVDEYYSKEQDRSIRFDDPQIGVEWGVKDLILSEKDLTAPLLEDSDAN
FSIRVLVTGVNGQLGHDVVKRLNQLGIETIGAGKGELDLTDREQTQDLIVKNKPDVVVHC
AAYTAVDQAEKDKDLCYVVNVSGTRNIAEACRKVDAKLVYISTDYVFDGEGTEPNLEAKT
TKPINYYGYSKEQGELAVKETLEKYFIIRTSWVYGMNGNNFVKTMLKLAQSKEEISVIND
QIGSPTYTLDLAVLICDMLQTTKYGIYHGVNEGYCSWHEFAIAIFDIAGISIKVNPISTI
QYNTKAKRPLNSRLSKENLDKNGLKRLPQWKDALGRFIKEKIMTGELSK
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgatggttacaaagacaaattttaagggattgcaaatcatcgagaccgatgtttatgga
gataatcggggctggtttacagaaagttacacaaagagtaagtttgttgaacacggtatt
gatatcgatttcattcaggacaaccaatcttattcagctcaaaaaggaacactacggggc
attcactttcagaataatccaaaagctcaaaccaagataattaggtgtacacgaggcgcc
attatcgatacagttgttgatttaagaaaaggttcagatacctacaaacagtggttcagt
atagagctgtcagctgagaacaagacacagctgctagtacctaaaggtttcggccatgca
tttctaacgataaccgatgatgtggaagtacagtataaggtggatgaatactattccaaa
gaacaagatcgaagtattagatttgatgatcctcagataggtgtcgaatggggcgttaag
gatctcattttgtcagagaaagacttaacagcgccgctcttagaagatagtgatgcaaac
tttagtattcgagtacttgtaactggggtaaatggtcaactgggccatgacgttgtcaaa
aggctgaatcagcttggtatagaaactataggtgcagggaaaggcgaattggatttaact
gatcgagagcagactcaggatcttatcgtaaaaaacaagccagatgtagtggtccactgt
gctgcatacactgcggtagaccaggctgagaaagacaaagatctttgttatgttgttaat
gttagcggaacgagaaatattgctgaagcttgtaggaaggttgatgcgaagctagtttat
atcagtacggattatgtttttgatggagaggggacagaacctaatctagaagcgaagact
acaaaaccgataaactattatggctattcaaaagagcaaggtgaactagctgtaaaagaa
accttagaaaaatactttattatcagaacatcgtgggtatacggcatgaatggaaacaac
tttgtaaagacgatgcttaaattggcacagtcaaaagaggaaattagtgtaattaatgac
caaatagggtccccaacttatacgctagacttagccgtgctaatttgtgatatgcttcaa
acaacaaagtatgggatctatcatggggtaaatgagggctattgtagctggcatgagttt
gctatagcaatttttgacatagcaggaattagtattaaagttaatccaatatcaactata
caatataatactaaggcgaagcggcctctaaattctaggttatctaaagaaaatcttgat
aagaatggacttaagagattacctcagtggaaagatgctttgggtaggtttataaaggag
aaaataatgacaggagaattaagcaaatga

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