Candidatus Contubernalis alkaliaceticus: HUE98_17140
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Entry
HUE98_17140 CDS
T07972
Symbol
spoIIID
Name
(GenBank) sporulation transcriptional regulator SpoIIID
KO
K06283
putative DeoR family transcriptional regulator, stage III sporulation protein D
Organism
calk
Candidatus Contubernalis alkaliaceticus
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
calk03000
]
HUE98_17140 (spoIIID)
Transcription factors [BR:
calk03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
HUE98_17140 (spoIIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIID
HTH_23
HTH_38
DUF7769
HTH_7
HTH_17
HTH_DeoR
HTH_Tnp_ISL3
HTH_Tnp_4
HTH_28
HTH_11
Sigma70_r4
HTH_IclR
HTH_31
MarR_2
LysM3_LYK4_5
HTH_10
LacI
GntR
PuR_N
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
UNC93654
LinkDB
All DBs
Position
complement(3473849..3474103)
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AA seq
84 aa
AA seq
DB search
MQDYIEQRVMEISNYILETGATVRQVASMFGVSKSTVHKDITDRLPDIHPTYAREVKKVL
DRNKAERHIRGGEATRKKYLSLKV
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggattatatagaacaaagagttatggaaataagtaattatattctagaaaccggt
gccacagtgagacaggtggccagcatgttcggggtaagcaaaagtaccgtacataaagac
atcaccgatcgactaccggacattcatcccacctatgccagggaggtaaaaaaggtatta
gataggaacaaggcagaaaggcatatccgggggggagaggctacccgtaaaaagtatctt
tctctcaaagtttaa
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