Candidatus Contubernalis alkaliaceticus: HUE98_17380
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Entry
HUE98_17380 CDS
T07972
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk00550
Peptidoglycan biosynthesis
calk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUE98_17380
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
calk01003
]
HUE98_17380
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
calk01011
]
HUE98_17380
Enzymes [BR:
calk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HUE98_17380
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HUE98_17380
Glycosyltransferases [BR:
calk01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HUE98_17380
Peptidoglycan biosynthesis and degradation proteins [BR:
calk01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HUE98_17380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF3955
Motif
Other DBs
NCBI-ProteinID:
UNC93696
LinkDB
All DBs
Position
3517999..3520053
Genome browser
AA seq
684 aa
AA seq
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MAKKRKISFFKIIILTFIVFFLTGIIGAGYIFYSIASLDTLPEPDIALTSKFYDSNGDLL
TTMYQEDRWEVTLNEIPLELQQAVIAVEDAHFYDHFGINLLSIGRAALRNIQKGRIVEGG
STITQQLAKNIYLTHDRTFQRKADELILTLHLERTYTKDEILNMYLNIIYFGHGNYGVES
AAKRYFGKSAKDLTLAESSMLAGIPRGPGYYSPLIEGNQQAARNRQTHVLNRMVELEFIT
PAQKQEALDQELVYKSLESGDRPAGHFINYIASTHLEVLLDIQREDVYRGGLNIYTTLDP
TMQAAAEDALRQELENFSQSYVDEQGILQPQGALVAVDPTNGHVKALVGGLNYRESNLNR
AIDSKRQPGSAFKPFIYAKALDSGYTAASQILCEPIAIPNPGSNKDYEPKDYGGGFHYRH
LTVREALVLSCNVSAVKVHMDIGPEETIRYAHNMGIKSHLDPYPSLALGTSTVTALEMAA
AYIPLANGGMAAEPVFVTRITDHRGRVLWEQDYKQTAALDERVAYILTDILKGVLVYPGT
GSAAGDILKRPAAGKTGTSNDYTDAYMVGYTPQLVASVYVGDDHNKSLGQTGGKLAVPIW
ANFMAKALMDYSPQDFSMPQGILQVKLCAETGLRQNERCSGPALEEIFISGTEPQEYCSE
DTCPYVEPERRWQWPFDIPQLPWF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaaagaaaaatatcatttttcaaaataattattttaacttttattgtgttt
tttcttaccggcattataggtgcaggctatattttttactctatcgcctctctagatacg
ctgcctgaacccgatatcgctctcaccagcaagttttacgacagtaatggggatcttttg
accaccatgtaccaggaggaccgctgggaggtgacgctgaatgaaatccctttagaactt
caacaagcggtcattgccgtagaggacgctcatttttatgaccattttggaattaacctt
ttgtccattggacgagctgccttaagaaatattcaaaagggacgcattgtagaagggggc
agcaccataacccagcagttggccaaaaatatatatttgacccacgaccggacttttcaa
cggaaggcggatgaactgattctgacattgcacctggaaaggacttataccaaggacgag
atcctgaatatgtatttaaatattatttattttggccacggcaattacggggtagaatct
gcggccaagcgttattttggtaaatcagccaaagaccttactctggctgagtcctctatg
ctggctggaatcccccgggggcccggatattattctcctctgattgaaggaaaccagcag
gcggcccgaaacaggcagacccacgtattaaaccgtatggtagagttggaattcatcact
cctgcacagaaacaggaggcgctggaccaggagctagtctacaaatctttggaaagtgga
gaccgtcccgcaggccattttatcaattatattgcttccactcatctggaggttctgctg
gatattcagagagaagacgtctaccgcggcggcctgaatatatatactaccctggatcca
accatgcaggcagcggcagaagatgccctgcggcaggagttggaaaatttctcccagagt
tacgtggatgagcagggtatcctgcagccccaaggggctttggtagcagtagatcctacc
aatggacatgtaaaagctctggtgggggggttgaattaccgggaaagcaatttaaatagg
gctatagacagcaaacgccagcctggttctgctttcaagccctttatttatgctaaagcc
ttagactcaggctatacggctgcttctcaaatcctctgtgaacccatagcaattcccaac
ccgggctccaacaaagactatgagcctaaagactacgggggaggatttcattaccggcat
ctgacggtccgggaagccctggtgctgtcctgtaatgtaagcgcagtgaaggtgcacatg
gacataggcccggaggaaaccattcgctatgctcacaatatgggaattaagagccatctg
gacccatacccctccctggccctgggaacatcaacagtaacagcactggagatggctgct
gcctatattcccctggctaacggtggaatggccgcagagccggtgtttgtcacccgcatc
accgaccaccggggtagggtgctctgggaacaggattacaaacaaacagcggccctggat
gaaagggtggcttatatattaaccgatattttaaaaggtgtgctggtttatccggggacc
ggttccgctgccggggacattctaaaaaggcctgctgccggaaaaaccggaacctccaac
gactataccgacgcctacatggtaggctacacccctcagctggtggccagtgtttacgta
ggggacgaccacaacaaatccctggggcagactggaggaaagttggctgttcctatctgg
gccaattttatggcgaaagctctgatggattattctccccaggatttttcgatgccgcag
ggcatcttacaggtaaagctttgtgctgaaaccggtttgaggcaaaacgaacggtgcagc
ggccctgccctggaggaaatttttattagcggcacggaaccccaggagtattgtagtgaa
gacacgtgcccctatgtagaaccggaacgccgctggcagtggcctttcgatatcccccag
ctgccctggttttag
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