Candidatus Chlorohelix allophototropha: OZ401_000126
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Entry
OZ401_000126 CDS
T09929
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
call
Candidatus Chlorohelix allophototropha
Pathway
call03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
call00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OZ401_000126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
call03400
]
OZ401_000126
Enzymes [BR:
call01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OZ401_000126
DNA repair and recombination proteins [BR:
call03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OZ401_000126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
AAA_22
PhoH
PIF1
Helicase_RecD
UvrD-helicase
TraI_hel_assoc_N
DEAD
SLFN-g3_helicase
AAA_28
TrwB_AAD_bind
nSTAND3
T2SSE
SRP54
HHH_2
DNA_pol_lambd_f
UvrD_C
NPHP3_N
RsgA_GTPase
TsaE
AAA
AAA_16
AAA_29
Zeta_toxin
AAA_5
ABC_tran
MukB
AAA_15
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WJW66881
LinkDB
All DBs
Position
1:139429..141798
Genome browser
AA seq
789 aa
AA seq
DB search
MTAAPAHLDNSTPTPRFSVLSGVVERITFQNEDNGWTVAKVQPDKGRKDELVTIVGNLPS
LAPGESLEMEGFWISNPTYGKQFKIEQYRVLLPATITGIQKYLGSGLIKGVGPKTSEKIV
NKFGMETLNILEIQPERLAEVPGLGMKKAEIIRKAWDEQKAIKEVMVFLQGHGISAALAV
KIYREYKDASIVVVKNEPYRLARDVFGIGFKTADKIASGMGVAKDDPERLKAGLLYTLSE
ASDDGHVFLPREELLKNGTELLEAASEQVEQALEALVEEQGVANERIYNLKEIPTLKPDS
PALADVDEWERSLHEERAPYVVATPEPQNAEIPLEAIYLPPFRNAEMGISAGVLRLRGAT
HDRLTSFKSAAFDVVFSYLSDKDGLVLNEKQKEAVQLALTEKVSVLTGGPGTGKTTSMRA
LLRVLQVKRKKVVLAAPTGRAAKRLSETTGASATTIHRLLELRPGGKAAFDRERPLDADM
VIVDEASMLDVLLMNNLLKAVPSGAHLLLVGDTDQLPSVGAGNVLGDIVNSGVVPVVRLD
QIFRQGADSAIVTNAHRINSGQMPQVGRDIADFFFFVEDDTEKAADLIVELVSKRIPARF
GVNSVRDIQVLAPMHRSRAGVGELNNLLQETLNPASERKRERRWGGRLFREGDKVMQLKN
NYEKLVFNGDGGYITLINHEDQFVRVALEDGREVEYDFAELDELSLAYCVSVHKSQGSEY
PVVVMPLLTSHYPMLQRNLVYTAITRAKKVVVLVGSKRALAMAIKNDRTGRRYTGLAPRL
KDFAPNKQL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcccctgcccacctagataattctactcccaccccgcgctttagcgtgctg
agtggcgtggttgagcgcatcacttttcagaacgaagataacggctggactgtcgctaaa
gttcaacctgacaaagggcgcaaagacgaactggtgacgattgtcggcaatttgccttcg
ctagcgccgggcgagagcctcgaaatggaaggcttctggatttccaaccccacttacggc
aaacaattcaaaatcgagcaataccgggtgcttttacccgccactataacgggcattcag
aaatatctgggtagcgggcttattaagggcgtaggacctaaaaccagcgagaagattgtc
aacaagtttgggatggaaacgctgaacattctggaaattcaaccggagcgtttggcggaa
gtgccgggtttgggcatgaaaaaagccgagattatcaggaaagcatgggatgagcagaaa
gccattaaggaagtaatggtttttttgcaaggacacggtatcagcgccgcgctggcagta
aaaatataccgcgagtacaaagatgcctctatcgtggtggtcaagaatgagccttaccgt
ttggcgcgtgacgttttcggcattggcttcaaaaccgccgataaaatcgcttcgggcatg
ggtgtggcgaaggacgaccccgaacgcttgaaagcgggcttgctctacaccctcagcgaa
gccagcgacgatgggcatgtgttcctgccccgcgaggaattgctcaagaacggcacagaa
ctgctggaagctgcctctgaacaggttgagcaggcgcttgaagcgttggtggaggagcag
ggcgttgccaatgagcgcatttacaatctcaaggaaatccccaccctcaaacctgattcg
cccgctttagccgatgtggacgagtgggagcgcagtttgcatgaagaacgcgccccctat
gttgttgcaacgcctgagccacagaacgcggaaattcccctcgaagcaatttacttgcca
ccttttcgcaatgccgagatgggtatcagcgcaggagttttgcgattgcgtggcgcaacc
catgaccgcctcacctctttcaaatccgctgctttcgatgtggttttttcctacctgtcg
gataaagatgggctggtgttgaatgagaagcagaaagaagcggtgcaactggcgttaacc
gagaaggtaagcgtgttgacaggtggacccggcacaggcaaaaccacttcgatgcgtgca
cttttgcgagttttgcaggtgaagcgcaagaaggtggttttggctgcacccaccggacgc
gccgctaagcgtctttccgaaaccaccggggcaagcgcgaccactattcaccgcctgctg
gaattgcgtccgggtgggaaagcggcttttgaccgcgaacgcccgttggatgcggatatg
gttatcgtggatgaagccagcatgctggatgtactgctcatgaataacctgctcaaggct
gtgccaagtggggcgcatttgctgctggtgggcgacaccgaccaattgccgagcgtgggc
gcgggtaatgtgctgggtgatattgtaaatagcggggttgtgccggtggtgcgcctcgac
cagattttcaggcaaggcgcagacagtgcgatagtcaccaacgcgcaccgcatcaacagt
ggtcagatgccgcaagtcggacgcgatatagccgatttctttttcttcgtggaggacgac
accgagaaagccgccgacctgattgtggaactggtttcaaagcgcattcccgcgcgtttc
ggcgtaaattcggtacgcgatattcaggtacttgcgccaatgcatcgctctcgcgccgga
gtgggcgagcttaataatttgctgcaagaaacgctcaatcccgcttccgaacgcaaacgc
gagcggcgttggggtggtcgcctgttccgcgagggcgacaaggtgatgcaactcaagaat
aattacgagaagttggtgtttaacggtgacggcggctatatcaccctcatcaaccatgaa
gaccagtttgtgagagttgcgctggaagacggacgcgaggtggagtacgatttcgccgaa
ctggacgagctttcgctggcttactgcgtttcggtacataagagtcagggttcagaatac
ccggtggtggtgatgccgctgctaaccagccattaccccatgctacagcgcaaccttgtc
tataccgccataacccgcgccaaaaaggtggtggtgttggtgggtagcaaacgtgccctc
gctatggctatcaagaacgaccgcaccgggcgacgctataccggactcgcccctcgcctc
aaggatttcgcgccaaataagcaattataa
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