Candidatus Chlorohelix allophototropha: OZ401_000172
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Entry
OZ401_000172 CDS
T09929
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
call
Candidatus Chlorohelix allophototropha
Pathway
call03030
DNA replication
call03430
Mismatch repair
call03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
call00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OZ401_000172 (dnaX)
03430 Mismatch repair
OZ401_000172 (dnaX)
03440 Homologous recombination
OZ401_000172 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
call03032
]
OZ401_000172 (dnaX)
03400 DNA repair and recombination proteins [BR:
call03400
]
OZ401_000172 (dnaX)
Enzymes [BR:
call01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OZ401_000172 (dnaX)
DNA replication proteins [BR:
call03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OZ401_000172 (dnaX)
DNA repair and recombination proteins [BR:
call03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OZ401_000172 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DnaX_C
AAA_22
RCF1-5-like_lid
AAA_5
AAA_19
AAA_30
RuvB_N
AAA_16
AAA_14
AAA_7
Mg_chelatase
AAA_assoc_2
AAA_18
AAA_6
DUF5560
Lar_N
PIF1
RNA_helicase
AAA_28
Rad17
Motif
Other DBs
NCBI-ProteinID:
WJW66927
LinkDB
All DBs
Position
1:complement(186194..188020)
Genome browser
AA seq
608 aa
AA seq
DB search
MAIVKKSMESDDTPDKLSRSQSLYRKWRSQTFGELVGQDAVTRTLKNAITTGRVGHAYLF
CGPRGTGKTSTARLLAKAINCLETEINARPCNKCEACRSISEGRAMDLIEIDAASNRGIE
DIRDLRDKINFQPSALRKKFYIIDEVHMLTEPAFNALLKTLEEPPPHAIFVLATTDPQDI
PTTVLSRCQRFDFQRISLEQIVARLRFVCSEEKVQAEKASLELVARQATGSLRDALSLLD
QLIVFSDGNITLETVKQMLGVMNSEAVPDFVEALLERGLASGLEQISNLVQSGVDLKRFN
RELVEHLRGMMLLKANPSARELLDLPHELLDRMQEQAKRINLSELITLLKIFSGVDYNLK
VSPYTQLPLEIALMEAVLAETVVQPQATTRQVPNRAAPTPTVAHREPPVINQHRPAIAAV
QKEPAIVSPIDEDEPPIAKAANPAEVAQVKKQPPVINPLRPLAPVNQQETPSTPAATDGA
NLTLAEVTQVWGQLLDKIGSAQVTVKALLTEAQPIGVQGKQIMLAFKYQFHREKISQEKT
RIFVEEQYSQLLGQTIYIQCVSDESTNPNSAGGSARTDSKNSGKGSSPLDERSRAAARIF
NATVQDFD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagtgaagaaatcaatggagagtgacgatactcccgacaagctaagtcgctcc
caatcactctaccgcaagtggcgctcacaaacctttggcgaactggtcggtcaagatgca
gttacgcgcaccctgaaaaatgccattaccaccggaagagtcgggcatgcctatcttttc
tgtggtcccagaggcaccggaaaaacttccaccgcacgcctattagccaaagcaataaat
tgcctcgaaactgaaatcaacgcacgcccttgtaacaaatgtgaagcttgccgcagcatc
agcgaggggcgagcgatggatttaatcgagattgatgctgccagtaaccggggtattgaa
gatatccgcgacttacgcgataaaataaatttccaacccagcgcattacgcaagaaattc
tatataattgacgaagtacatatgttgaccgaacctgcttttaatgcgctgctcaaaact
ctggaagaaccgcctccgcacgccatctttgtgcttgctactaccgacccgcaagatatc
ccgacaacagtattatcgcgctgtcaacgctttgatttccagcgtatcagccttgaacaa
atagtggcacggcttcggtttgtatgcagcgaagaaaaagtgcaggctgaaaaagcttct
ctcgaattggtagcgcggcaggcaaccggaagtctgcgcgatgctcttagcctgcttgat
cagctaattgttttcagcgatgggaatatcaccctcgaaactgtcaagcaaatgcttggt
gtaatgaatagtgaggctgtccccgatttcgtagaggcattgcttgaacgtgggcttgca
tcagggcttgagcaaatcagcaatctggtgcaaagtggtgttgatttgaagcgtttcaat
cgtgaattggtagaacacctgcgcggcatgatgctactcaaggcaaacccatcggcgcgc
gaattactcgatttaccgcacgagctactggatcggatgcaagaacaggcaaagcggata
aatttatctgaattaattaccttactcaaaattttcagcggagttgattataacctgaag
gtatcaccttatacccaattgccgcttgaaattgcgcttatggaagcagtgttggctgaa
acggttgtgcaacctcaagcgacaacccgccaagtccctaaccgtgctgcccctaccccg
acggtagcgcatagagaaccgcctgtcattaatcagcaccgtcctgccattgccgcggtg
caaaaagaaccagccatagtgtcccctattgatgaggatgagccaccaattgccaaagca
gcaaacccagcagaagtagcgcaggtgaaaaaacagccgcctgtaataaacccactacgc
cccttagcgcctgtaaaccagcaagaaacgccctctacgccagcagcaacagatggcgca
aacctgactcttgctgaagtaacacaagtatggggacaattgctggataaaatcggtagc
gcacaagtcaccgtaaaagcgttacttaccgaagcgcaaccaataggagtacaaggcaag
caaattatgctagctttcaaataccagttccatcgtgagaaaatttctcaggaaaagacc
agaatttttgtagaagagcagtatagtcagctattgggtcagacaatttatatccagtgc
gtatctgatgaaagtaccaacccgaatagtgcgggtggttctgcgcgtacagattctaaa
aattccgggaaaggtagctcaccgctggacgaacgttcacgtgcagcagcgcgaatcttt
aacgctactgtacaggattttgattag
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