Candidatus Chlorohelix allophototropha: OZ401_000512
Help
Entry
OZ401_000512 CDS
T09929
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
call
Candidatus Chlorohelix allophototropha
Pathway
call03030
DNA replication
call03410
Base excision repair
call03420
Nucleotide excision repair
call03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
call00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OZ401_000512 (polA)
03410 Base excision repair
OZ401_000512 (polA)
03420 Nucleotide excision repair
OZ401_000512 (polA)
03440 Homologous recombination
OZ401_000512 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
call03032
]
OZ401_000512 (polA)
03400 DNA repair and recombination proteins [BR:
call03400
]
OZ401_000512 (polA)
Enzymes [BR:
call01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OZ401_000512 (polA)
DNA replication proteins [BR:
call03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OZ401_000512 (polA)
DNA repair and recombination proteins [BR:
call03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OZ401_000512 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OZ401_000512 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
ACP_syn_III_C
Peptidase_M32
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WJW67253
LinkDB
All DBs
Position
1:complement(573006..575882)
Genome browser
AA seq
958 aa
AA seq
DB search
MSSQSNKPRLMLIDGFGLIFRAYHAVPPGLVTSRGELTNATFGFTSMLLEVLRREMPQYI
VMAFDTGRTFRHDDYVEYKANRSEMPEDLRGQLARIREIVEALGISIHEAVGFEADDVIG
TLARQAEMMGLEVLIITGDNDLLQLVNKHTHAALPGAGPKARFSEVRYFDVDKVKEKYTF
SPEYIPDYKAITGDKSDNIPGIPGLGEVTARKLINLYGHLDNIYAHLAEIKPPKVQTALE
TFREQALKSKYLATIVTEVPIKLDLDMARAHQMDRDRVVNIFREVEFRSLLNHLPDAPAI
VKASTKVSNKNEQLNLWDMPEVAPEAPETKPETESKYKLIRDSSALAKLVERVRQTSVLS
FDTETTSEDPMRANLVGVSIAPTPDESYYIPIGHVKAVSSAVFELLPDQLEWEEVRPVLE
ELFNDSHIRKIAHHAKYDLAILQRHGMALERLDISFDTMLAAQIAGKTSSRLKDLAFEEL
GVEMTRIDALIGSGKNQTTMDRVPIETAGQYAAADADNTLKLVSVFEKDLSLNKLEKVFH
EIEMPLIPVLTGMELVGVALDTARLGTLSTSLYQKISELEKNIFNEVGHQFNINSPDQLG
KVLFEELGLQGGKKTATKKFSTDKKTLDTLRGAHAVVDLVLEYRQFGKLKSTYVDSLPLL
LNLETGRVHTSFQQIGASSGRMSSNNPNLQNIPIRTEIGREVRRAFIADNISNKRLFGND
KAILVSADYSQIELRLLAHLTGDERLTSAFLANKDIHRATAADVFGIPEEQVTDDMRRVA
KTVNFGIIYGLSAFGLTQQINITYQEAAAFIENYKAKYPSVWHYLESTPEEARKTGFVQT
LFGRRRYMPELNAGNPILRKEAERAAINMPVQGTAADIVKIAMRRVWDALNSQKLRAKLL
LQVHDELVFEAPESELPELAALVHTHMEAVEKDVQLSVPLKADLKYGLNWGEMEKYAL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccagagtaataaaccccgcttgatgctgattgatggcttcggcttgatattc
agagcatatcacgctgtaccacccggattggtaacttcgcgcggtgaactaaccaatgct
accttcggtttcacttcgatgttactggaagtgctgagacgcgaaatgcctcagtatata
gtgatggctttcgataccggacgcactttccgccacgacgattatgtggaatataaagca
aaccgaagcgaaatgccggaagatttgcgcggtcaactcgcccgtatccgtgagattgtc
gaagcgttaggtatttcaatccacgaagcagtaggctttgaagcggacgatgtcattggt
actttggcgcgtcaggctgaaatgatggggttggaagttctaattatcaccggagataac
gacctgttgcaactggtcaacaaacatacgcacgctgctttgccgggagcaggaccgaaa
gcccgtttcagtgaggtgcgctactttgacgtagataaggttaaggaaaaatacactttt
agcccggaatatataccggactataaagccatcaccggagataaaagcgataatattccg
ggtatccccggtttgggtgaagtaaccgctcgtaagctgattaacctatacgggcatctt
gataatatctatgcacacttggctgagataaagccgcctaaagtacaaactgcgttggag
acatttcgagaacaggcgctaaagagcaagtatttagcgaccattgttaccgaagtaccg
ataaaacttgaccttgacatggcgcgagcgcatcagatggatcgcgaccgggtagttaac
attttccgtgaagtcgagtttcgcagtctgctaaaccacctacctgatgctccggctatt
gtaaaagccagcacgaaggtttcaaataagaatgagcagctaaatctctgggatatgcct
gaggttgcgcctgaagcgccggaaactaaacccgaaacagaaagcaagtacaaactaatc
agggatagctccgcactggcaaagttggtagagcgggttaggcaaaccagtgtactttcc
tttgataccgaaaccaccagcgaagaccctatgcgggcgaatctagtaggcgtatctatc
gcgcctacacctgacgaaagctattacataccgataggacatgtaaaagcggtttctagc
gcggtatttgaattgttgcccgatcaacttgaatgggaggaagtgcgccctgttctagaa
gagcttttcaacgatagccacatccgcaagattgcccatcatgccaagtatgatttggct
attttgcaacgacatggcatggcgctggaaagactcgatataagtttcgacacgatgctg
gcagcgcagatagccggaaaaacctcctcgcgactcaaagacctagcgtttgaagagtta
ggcgtggaaatgacccgcattgatgccctaatcggcagtggcaagaaccagactacaatg
gatcgagtaccgattgagacagcggggcaatacgccgccgcagatgccgataacaccctg
aaattggtatctgtttttgaaaaggatttgagcctaaacaagctggaaaaagtctttcac
gagatcgagatgccgctgattccggtgctgaccggaatggaattggtgggagttgcgctg
gataccgctcgtcttggtacgctctccaccagcctttaccagaaaattagcgaattggaa
aagaatatattcaacgaagtaggtcaccagttcaatatcaattcgcctgaccaacttggc
aaggttttatttgaagaattgggcttgcaaggtggcaagaaaaccgctactaaaaagttc
tcaaccgataaaaaaacgttggatacgctgcgaggcgcgcatgctgtcgtggatttggtg
ctagagtatcggcaattcggcaagctaaaatcaacctacgtggacagcctgcctttactg
ctaaatttggaaaccgggcgggtgcatacctctttccagcaaattggggcgagtagtgga
cgcatgagtagcaacaaccccaacctgcaaaatatcccgattcgtaccgaaattgggcga
gaggtgcgccgcgccttcattgccgataacatcagcaataagcgactgttcggcaacgac
aaagctattttggtttctgccgattacagccaaatcgaattgcgtttattggcgcatctg
accggagatgagcgtttgaccagcgccttccttgccaacaaggatattcatcgcgctact
gccgccgatgtttttggaataccggaagaacaggttaccgatgatatgcgacgggtggca
aaaaccgtcaactttggcataatctacggcttgagcgcgttcggactcactcagcaaatt
aatatcacttaccaagaagctgccgcatttatcgagaattacaaagcgaaatatccaagc
gtgtggcattatctggaaagtacccccgaagaggcacgtaaaaccggctttgtgcaaacc
ctgttcgggcggcggcgctatatgcccgaattaaacgccggaaaccccattttgagaaaa
gaagccgaacgcgccgcgattaatatgccggtgcagggtactgctgccgacattgttaaa
attgcgatgcggcgtgtctgggacgcgctgaacagccaaaagctgcgagctaaattatta
cttcaagtgcatgacgaattggtatttgaagcgcccgaaagtgaattaccagagttggcg
gcattggttcacacgcacatggaagcggttgagaaagatgtgcaactgagtgtaccgctc
aaagccgatctaaaatatggcttgaactggggagagatggaaaaatatgccctgtaa
DBGET
integrated database retrieval system
