Candidatus Chlorohelix allophototropha: OZ401_001543
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Entry
OZ401_001543 CDS
T09929
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
call
Candidatus Chlorohelix allophototropha
Brite
KEGG Orthology (KO) [BR:
call00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
call03021
]
OZ401_001543
Transcription machinery [BR:
call03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OZ401_001543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_16
HTH_24
PhyR_sigma-like
HTH_38
HTH_3
HTH_28
HAAS
TEBP_beta
Motif
Other DBs
NCBI-ProteinID:
WJW65765
UniProt:
A0A8T7M3M6
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All DBs
Position
1:1796064..1796669
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AA seq
201 aa
AA seq
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MGFTGETSAKNISSTTGIDDLVKRASRSDTEALGEIYDRYSGRVYAFLLRSVDKEMAEEL
LQDIFVVLWQKCGMYNPALGSFEGWFFTLVRHRLYDALPSYQKRLSRAVSAQPGSVESPI
DMLESKFDMEEHIIKLFRDEEIRNALKDLPPEQRQAILMTYFGGLSQREVAEELNLPVTT
IKGRARMGLQRLRQLLPEQLL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttgggatttactggcgaaacatctgctaaaaatatatcgtctactactgggatagatgat
ttggtcaaaagggcaagccgtagtgacacggaagcgctaggtgaaatttacgatcgctat
tctggtagggtttatgctttcttgctcagatcggttgataaagaaatggcggaagaattg
ctacaggatatatttgtagtcctgtggcaaaaatgtggcatgtataatcctgcccttggc
tcattcgaaggttggttttttacgcttgtgcgtcatcgcctttacgatgcgctgccttct
tatcaaaaaagactgagccgagcagtatccgctcaacccggttcggtagaatctccaata
gatatgttggaaagcaaatttgatatggaggaacatataataaaacttttcagagatgaa
gagatacgaaatgctttgaaagatttgccacctgagcaacgacaggctattttgatgact
tattttggtggtttgagccagcgtgaagtagctgaagaacttaatttaccggtaaccact
attaagggacgtgctaggatggggctgcaaagattgcgtcaattgttgccggagcaattg
ttatga
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