Candidatus Chlorohelix allophototropha: OZ401_002915
Help
Entry
OZ401_002915 CDS
T09929
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
call
Candidatus Chlorohelix allophototropha
Pathway
call03030
DNA replication
call03430
Mismatch repair
call03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
call00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OZ401_002915
03430 Mismatch repair
OZ401_002915
03440 Homologous recombination
OZ401_002915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
call03032
]
OZ401_002915
03400 DNA repair and recombination proteins [BR:
call03400
]
OZ401_002915
Enzymes [BR:
call01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OZ401_002915
DNA replication proteins [BR:
call03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OZ401_002915
DNA repair and recombination proteins [BR:
call03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OZ401_002915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
WJW69307
LinkDB
All DBs
Position
2:complement(430617..433502)
Genome browser
AA seq
961 aa
AA seq
DB search
MEQPFSAFSDLRVHSHYSYRDGVCSVAELARCAAELGRPALALTDHNHAAGFIELQEAAD
KYSLKPIFGVDATVADENGQFYKLVLLAKNEGGLQNLFRLLTWAGTEGFDLYGQNKPVLA
ESKLLGKADGIAVIGSDFPDGLGAQRASRLREACGEDFYVELLSHQSANVERVRLAEFAQ
QHNLPIVATSDVHHISPEQARTRDLLWAIADNVRFDDPNRRRPASSEAYPRTLAELAEIY
AAVPEALRNAATLAASCEVRLPKSGLIIPDYVLPPTFQPDTGVTYSAVGQYLAQVAAANL
QARYGEIPTNMQTRLDYELGVIEKAGFNQYILIVADIVQRAHELGILCAPRGSSAGSLVC
FALGITPLNPLDFNLVFERFLNPERLSPPDIDLDIADEDRPRLLDYVVRKYGVNNVAHII
THNFEGAKSALRDAGKALNIDSGLVNRLSGLVPLEFQRPYTLARTLEEVKEVQQLYKRDK
AAKELIDAALLLEGTGRNNGTHAAGVVITPRPTQEYVPLIRTEGLAQQQRDTSQPNTEST
GWFTPTVMTQWDMQGVEKRGLLKIDLLGLTAWSTITRTLDFIRQERDIALDVWQLPLDDE
KTYDTIGQGFTTGVFQLENRGMTDFAANMKPRSIADLGFLIAAYRPGPMPFLGKIMAVRS
GREKLEAPHPFLEPLLAESYGAPVYQETMLRIAVEVAGYSLGEADALRKAISKKNQVELE
AQHIRFVEGARKTKELSEAEAEAIWQFFPPFAFYGFNQAHAIIYGYLTYITAYLKTSYPL
EYMAALLGAAGGDLAALGKAAAECRRLNVPLLAPNINRSMARITLENLSDGQRALRLGLS
AVKGLGPTGVEAIIALRNESGDYIGLVDFVRRVPGRSVNSRALVALARVGALPFGNRAQL
ETAIPAAQKAAKAKEFQEIVLPDLAEYPDETVQAYENELLGFALTLNESGLAPDGGSNGV
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacctttctccgctttttccgatttgagagtacactcgcactatagctatcgc
gatggcgtgtgttcggtggctgaacttgcccgctgtgccgcagaattgggtcgtccggca
ttagccttgaccgatcacaatcatgcggcgggtttcatcgagttgcaagaggcggcagat
aaatatagcctcaaacctatctttggggtggatgcaaccgtagcagatgaaaatgggcag
ttttacaagctggtattattggcaaagaacgaaggcgggttacaaaacctcttcagacta
ttgacatgggctggtactgaaggttttgatttatacggtcaaaataaacctgtactggca
gaaagcaagttgctgggaaaagcagacggaatagcggtaatcggtagcgatttccctgat
ggacttggtgcgcagcgtgcttcccgtttacgtgaagcctgtggcgaagatttctatgta
gaattgctctcacaccaatcggcaaatgttgagcgtgtgcggttggcagaatttgcgcag
cagcataacttgccgatagtggctacttctgatgtacatcacatatcccctgaacaagct
agaacccgcgacctgttgtgggcgattgccgataacgtgcgctttgatgatccaaaccgc
cgtcgccctgcttcctccgaagcctacccgcgaacactggcagaactggcagaaatttac
gctgccgttcctgaggcattgcgcaatgccgccacgcttgcggcttcttgtgaggtgcgc
ttgccaaaatccgggctaattatccctgattacgtcttgccgcccacttttcaacctgac
accggagtaacttattcagcggtagggcaatatctggcacaagtggcagccgcaaatttg
caagcgcgttatggcgaaatacccacgaatatgcaaacacggctggattatgaactggga
gtaatcgaaaaagcaggctttaatcagtacattttgatagtagctgatattgtgcagcgt
gcgcacgaattgggtatcctgtgcgcaccgcgtggtagtagcgcgggttcgttggtgtgt
tttgctttgggtataaccccgcttaacccactagatttcaacctcgtttttgagcgattt
ttaaatcctgaacgcctatccccacccgacattgatctggatattgccgacgaagaccgt
cctcgtctgttggattatgtggtgcgaaaatatggcgtaaataatgtagcgcatattatt
acgcataattttgagggcgcaaaatcggcgttgcgggatgcggggaaagctttgaatatt
gatagcggattggtaaatcgtctttccggcttagtgcctctcgaatttcaacgcccctat
actcttgcgcgtacacttgaggaagttaaagaggtgcagcaactttacaagcgcgataaa
gcggctaaagaattgatagatgctgctttgttgctcgaaggtacagggcgcaataacggc
acacacgcggcaggtgtagtgattaccccgcgccctactcaagaatatgtgccgctcatt
cgcaccgaaggcttggcgcagcaacagcgtgatacctcgcaaccgaataccgaaagtacg
ggctggtttactcctaccgttatgacccaatgggatatgcaaggggtcgagaagcgcggt
ctgctgaaaatagatttgctgggtttaaccgcttggtcaactattactcgcacccttgat
tttatcagacaagagcgcgatattgcgttggatgtgtggcaattgccgttggatgatgaa
aaaacctatgatactatcgggcagggttttaccacaggcgtttttcagcttgagaaccgg
ggcatgaccgattttgcggcaaacatgaagccgcgcagtatcgccgacctcggtttcctg
attgcggcttaccgccccggtccgatgccctttctgggcaagataatggcggtgcgtagt
ggtcgcgaaaaactggaagcgcctcacccttttcttgaacccttattggcggagagttat
ggtgcgccggtttaccaagaaactatgctgcgaattgcggtggaagttgccggttattcg
ctaggtgaagccgatgctttgcgtaaagcaatcagcaagaagaatcaggtggagttggaa
gcgcaacacattcgctttgtggaaggtgcgcgcaaaaccaaagagctatccgaagcggaa
gcagaagcaatctggcaattttttccaccgtttgccttttacgggtttaaccaggcacat
gccatcatttatggctatctgacttatatcaccgcttatctgaaaaccagttacccgctc
gaatatatggcagccttgctcggggcggcggggggtgatttggcggcactgggaaaagcg
gctgccgaatgtcgccgcctgaatgtgccgttgctcgccccgaatatcaatcgaagtatg
gcgcgtatcacccttgaaaacctgtcggatgggcaacgagctttgcggctggggctatca
gcagtcaaaggattaggtcctactggcgtggaagcaataattgcattgcgaaatgagagt
ggcgattatatcgggttggtcgattttgtgagacgagtgccgggacgctcggttaattca
cgggcgttggtggcattggcacgggttggggcgctaccctttggaaaccgggcgcagcta
gaaacagctattccggcggcacaaaaagcggcaaaggcaaaggaatttcaggaaattgtg
ctacctgacttagcggaatatcctgacgaaacggttcaagcttacgaaaacgagttgtta
ggttttgctcttacgcttaacgaaagtgggcttgcgccagatggcgggagcaatggagtt
gcttag
DBGET
integrated database retrieval system
