Candidatus Chlorohelix allophototropha: OZ401_003295
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Entry
OZ401_003295 CDS
T09929
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
call
Candidatus Chlorohelix allophototropha
Pathway
call03030
DNA replication
call03430
Mismatch repair
call03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
call00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OZ401_003295
03430 Mismatch repair
OZ401_003295
03440 Homologous recombination
OZ401_003295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
call03032
]
OZ401_003295
03400 DNA repair and recombination proteins [BR:
call03400
]
OZ401_003295
Enzymes [BR:
call01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OZ401_003295
DNA replication proteins [BR:
call03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OZ401_003295
DNA repair and recombination proteins [BR:
call03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OZ401_003295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DNA_pol_A_exo1
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WJW69667
UniProt:
A0A8T7M741
LinkDB
All DBs
Position
2:complement(892429..894567)
Genome browser
AA seq
712 aa
AA seq
DB search
MSQTTDTNSPEGYAELTRRAYLFLEKHEGRASEAALIQGVFGVRGTTKSLELWSGILGKV
LNDPERFQHLPGGEWVLRSHTDTTQPLQRLEYVVIDTETTGLHPHRCRMIEVAAVKLRNG
QQVDTFQSLINPQRRIPGFITTLTGINNQMTASAPTFAGVANNFMEFLGNAIVVGHNVLF
DLRFLNYELGLLHRPALVNEAIDTISLSLRLFPGIRRPNLDRLAEMTGVNIKNRHRAFGD
ATTTAEAFMKLLEIAALNGFETLDDLRTGRVRQAEISMPETPPKKEVPSLFESEMLEERP
DRIKVTRPHWKQPYEDASSLTNRATAHARDVLSRELIRDLPDKPGVYLMKDLDDGVIYVG
KAKNLYARVSSYYSEPLGYTRKMDGLVEAIKRIDHIVTGSELEALLLESRLIKKYKPRYN
SQLRNYESYPFIKIDLSQRFPRVQSCREILDDGARYFGPFQSRRAVDTTIRVIEQMFTVR
DCTRNFETEYLAKRRQPRPACMRLYTNRCPGPCVGNHSDHEHEEYLKVIDEVVNFLSGEK
EAVLDVIWKRINRAVAERDFEKAAAMRDALAQTQQVIASQKYLARAVEGNHALLCLPSST
ENCLEILCIFSGRLGKQLKLSRTDSPQQTAAKLQQTWLDLEEWEARLAASQPGWGKKGGR
VIGQEAVDEINIISRWIYQHSDDPGIISIPRDNTHNSTFWQEISTRIYNSFK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaactaccgatacaaattcacctgaaggatacgcggaactaacccgccgtgct
tatctctttctggaaaaacatgaagggcgtgcctctgaggcggcgttgattcagggcgta
ttcggagtaaggggcactaccaagtcgttggaattatggagcgggattctggggaaagtt
ttaaatgaccccgaacgcttccagcacttacccggcggagagtgggtattgcgcagccat
acagatactacccaaccactccaacgccttgaatatgtggtaatcgacaccgaaactacc
ggattacaccctcatcgttgccgtatgattgaggtcgctgccgttaaattacggaatggg
caacaggtagatactttccagagcttgataaaccctcagcggcgtattcccggcttcatc
accaccctaaccggaatcaataaccagatgactgcatctgccccgacttttgcgggagtc
gccaataattttatggaatttctcggcaatgcgattgttgtgggacataatgttttgttt
gacctacgcttcctgaattatgagttggggctactccatcgcccggcgttggtcaacgaa
gcaatcgacaccattagtctgtctttgcgtctgtttcccggaatacgccgtcccaacctt
gatcgcctagcggaaatgacgggagtcaacatcaagaaccgccatcgcgcttttggtgac
gcgactactaccgccgaggcttttatgaagctgctagagattgccgctctgaatggcttt
gaaactttggatgatttacgcaccgggcgagtcaggcaagcggaaatttctatgccagaa
acgcctccaaaaaaagaagtcccttcgctgtttgagtcggaaatgctggaggaaagaccg
gatcgaatcaaggtaacacgcccacattggaagcaaccttatgaggatgccagtagccta
accaatcgcgccaccgctcacgctcgcgatgtgctatcgcgtgaattaatcagggatttg
cctgataagcccggcgtttacctcatgaaagacctagatgatggggtaatatacgttggt
aaagccaagaacctatatgctcgcgttagcagttactacagtgaacctttaggttatacc
cgtaaaatggatgggctggtggaagctatcaagcgcatcgaccatattgtgacgggtagt
gaattagaagccttattgcttgaatcgcgtcttatcaagaaatacaagccgcgttacaat
agccagttgcgcaattatgaatcttatccctttattaaaatcgacctatcgcagcgattc
ccgcgtgtgcaatcttgtcgtgagattctcgatgatggggcgcgttattttggacctttt
cagagccgtcgtgccgttgatactaccatccgggttattgagcaaatgtttacggtgcgt
gattgcacccgcaactttgagactgagtatctggcaaaacgtcggcagccgcgccctgcc
tgtatgcgcctttataccaaccgttgccccggtccgtgtgtaggtaatcattcagaccac
gagcatgaagaatatctcaaagtgattgatgaggtagttaatttcctgagcggtgaaaaa
gaggcagtgctagatgttatttggaaaagaatcaatcgggctgtagccgagcgcgatttt
gagaaagccgccgctatgcgggatgcgttggcgcaaacccaacaggtaattgccagccag
aagtatctggcaagagcggtggaaggcaaccacgccttactttgcctgccctcctctacc
gaaaattgtctggagattttatgcatcttttccggtagacttggtaaacagttaaagttg
agtcgcaccgactcaccacaacagaccgccgcaaaacttcaacagacttggcttgatctg
gaagagtgggaagcgcgcttggcagcctcacaacccggttggggcaaaaagggtgggcga
gtaatcggtcaagaagccgttgatgagattaatattatttcgcgttggatttaccagcac
agtgatgaccccggcattatttccatcccccgcgataatacccataactccactttctgg
caggaaatatcaactcggatatataatagcttcaagtaa
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