Candidatus Chlorohelix allophototropha: OZ401_003559
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Entry
OZ401_003559 CDS
T09929
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
call
Candidatus Chlorohelix allophototropha
Pathway
call03030
DNA replication
call03430
Mismatch repair
call03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
call00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OZ401_003559
03430 Mismatch repair
OZ401_003559
03440 Homologous recombination
OZ401_003559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
call03032
]
OZ401_003559
03400 DNA repair and recombination proteins [BR:
call03400
]
OZ401_003559
Enzymes [BR:
call01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OZ401_003559
DNA replication proteins [BR:
call03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OZ401_003559
DNA repair and recombination proteins [BR:
call03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OZ401_003559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Helicase_C_2
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WJW69928
LinkDB
All DBs
Position
2:complement(1209078..1212032)
Genome browser
AA seq
984 aa
AA seq
DB search
MSVDRNKKQGYRDNHPARVYVALDIESTGGGEADQGEIIEVAAIRFRLEEGSVARVLERW
QTLVRPRNPIPYKISHLTGIRQTDVEHAPTFSEIRDKLQQFLGNFPLVGHSIESDFAFLS
RQEFRVSNIPLDTYELATLILPQMGNYSLVAVANALEIQANGEAHRALADTYMAMNVFAA
LLGKLEELPRKVINEVNRIASNLQEWPLRRLFEEASEILARQERNSGGLGSLGALLKQQL
SEKQGSDNDLIFLVSEDKPQPLQPRPDFKFPYSELNERVASASLPIRAILDSNQHMLLEM
PGNDHTRAMGLLAPAIEVAVQSGQSVVIAANSETQRDRMLNKAIPELQKLLATQETPDDN
FIATKEKRRRRSEEKPTFIANTVKHQNSYICLRRWENFRNMEGLTSDELKLLIKVLLWLP
NTTNGDGAELRIMQQERLWSRINTQKGLCLASHCQYNQRHQCFYFKARDRAEASHIIVTD
QALVLADAAGQAGTLPHFDYTLIDDAHHLEDEAGRQFGSAITPNTLFDFLDWIYRPVTWK
TEGGSSGFLSTFFRYFGDDTSTEIKEPINSKLSAAISHIEICRSSTDNLLRDLTELVNQI
NQDSGQGDGRIRLDGKFYSSPEWGSIAGTWEVFKQDWEELYYHLRDLRDEAHNFKGALLN
TEEMMLDLNYYINQANYLLNRLSPAFDGSDNAQVHWMALHPRTQLVGIFSAPLQVDSGLR
HMLFNHKKSVVLASPTMTTDGDFKFLRNRLGLHEAKELRLHPERDYAATTLLYLPNDMPE
PSQPGYQKSIDQHIIDMVKGCEGRMLALFTSNSSLRMTYKAVQRPLEQQNILVLGMGLDG
TRRSVLNRFKNTPHALLLSTLGHWDNPELFNDEENSALSFSVLAITKLPFDPPSDPVFAA
RIESRQYNDPFLQYSLPRTILRFKQAYERLLEAMPGRGVVVVLDSRLTRRAYGPTFLNSL
PALRTKHDTLTHLVPELRNWLELS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggacagaaacaaaaaacagggctaccgcgataatcaccctgcgcgtgtgtat
gtggcgctggatatcgaaagtaccgggggtggcgaagctgatcagggcgaaataatcgag
gttgcggctatacgcttccgtttggaggaaggtagtgtagcacgggttttggaacgctgg
caaacgctggtacgcccgcgcaaccccatcccttacaaaatctcccacttgacgggcata
cgtcaaacggatgtagagcacgcccctacctttagtgaaatccgagacaaattacaacaa
tttctgggcaatttcccattagttgggcattccatcgagagtgatttcgcttttctgtca
cgccaagaatttcgagtctcgaatattcccttagatacctacgaattggctaccctgatt
ctgccacaaatgggcaattacagcttggtagcagttgccaatgcgctggaaattcaggct
aacggtgaagcgcatcgcgcccttgccgatacttacatggcaatgaatgtttttgcagcg
ttgctaggtaagttggaagaactcccccgtaaagtaataaatgaggtaaatcggattgcc
tcaaatttgcaagagtggcccctacgccgtctttttgaggaagcttcagaaattctggcg
cggcaagaacgcaatagtggcgggttaggcagcctcggcgctttgctcaagcaacaactt
tctgaaaagcaaggtagcgataatgatttaatctttctggtttcagaggacaagccgcaa
ccgctccagccacgtccagattttaaatttccctattcggaattaaacgagcgagttgcc
agcgccagtttgccgatacgcgctatactcgattcaaaccagcacatgctccttgagatg
cccggaaatgaccatacccgcgccatgggcttattagcgccggcaatagaagtagccgtc
cagagcggtcaaagcgtggttatcgctgccaatagcgaaacccaacgagatcgtatgctc
aacaaagcgattccggaattgcaaaaacttctggcaacgcaggaaacaccggatgacaat
ttcattgctactaaagaaaagcggcgacggcggagtgaagaaaaaccaacttttattgcc
aacaccgtcaaacatcaaaactcctatatatgcttgcgccgttgggaaaacttccgcaat
atggaagggctgacctcagatgagttaaagttgctaatcaaagtgcttttgtggttgcct
aatacgacaaacggcgacggcgcggaattgcgcataatgcaacaggaaaggttgtggtcg
cgcataaacacccagaaggggctttgccttgcctcacactgtcagtataatcagcgccac
cagtgcttttatttcaaggcgcgcgaccgggcagaagcctcgcacatcatcgtaaccgat
caagcgttggtgcttgccgatgcagcagggcaagcaggaacgttgcctcattttgattac
accctcattgacgacgcgcatcaccttgaagatgaggcaggtcgccaattcggttcagcc
atcacccccaatacgctattcgatttcctagattggatataccgtcctgtaacctggaaa
accgaaggaggaagtagcggtttcctatccactttcttccgttactttggtgatgatacc
agtacagaaatcaaagaacccataaatagcaaactttccgctgcaatttcccatatcgag
atttgccgtagctctaccgacaatttgcttcgagacctaaccgagttggttaaccaaatt
aatcaggattcggggcaaggggatgggcgtatccgcttagatggcaaattctacagcagc
ccagaatggggcagcattgccggaacgtgggaagtgttcaaacaggattgggaagagcta
tattatcatttgcgcgatttgcgcgacgaagcgcataatttcaaaggggcgctgctcaat
accgaagaaatgatgctagatttgaattattacatcaatcaggcaaactatcttctcaac
cgtctttctcccgcctttgacggttctgacaatgctcaggttcattggatggctttgcat
ccgcgtacccaactggtcgggatttttagcgcaccgttacaggtcgattcgggtttgcgg
catatgctcttcaaccataaaaaaagtgtggtgctggcttccccaaccatgaccaccgat
ggggatttcaagttcttgagaaatcgattaggcttgcatgaagcaaaagaactgagatta
catcctgagcgtgattatgcggctaccaccctgctctatctacccaacgatatgcctgag
ccttcacaaccgggttaccagaaatcaatcgaccagcatatcatcgacatggtaaaaggg
tgtgaggggcgcatgctggcattgttcacttccaatagctcgttgcgaatgacctataaa
gctgtacaacgcccgctggaacagcagaatattctggtgctgggtatgggactagacggt
actcgccgcagcgtgcttaatcgtttcaaaaacacgccccatgcccttctgctcagcaca
ttgggacattgggataacccagagctttttaacgatgaagaaaacagcgcattatctttc
tcggtactcgccattacaaagttacctttcgacccgcccagtgaccctgtatttgctgcc
cgtatcgaaagcaggcaatataatgacccatttctgcaatacagtttgccgcgtaccatt
ctgaggttcaaacaagcctacgaacgactactagaggcaatgccgggacgtggggtagta
gtggttttagatagtcgcttgactcgtcgcgcatatggtccgactttcctaaactcgctt
ccggcgctgcgtaccaaacatgatacactgacgcatttggtgccagaattgagaaattgg
ctggaattatcctaa
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