Candidatus Chlorohelix allophototropha: OZ401_003949
Help
Entry
OZ401_003949 CDS
T09929
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
call
Candidatus Chlorohelix allophototropha
Brite
KEGG Orthology (KO) [BR:
call00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OZ401_003949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
call03021
]
OZ401_003949
Transcription machinery [BR:
call03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OZ401_003949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
CENP-B_N
HTH_3
KORA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WJW68340
UniProt:
A0A8T7M8Q8
LinkDB
All DBs
Position
2:complement(1682480..1683616)
Genome browser
AA seq
378 aa
AA seq
DB search
MMGQKASNTSSYINSKAQAVHLGEETLLNGNSSEETEETDELEGSLDEPTGAMLAEVEEL
EKDALGESLTPVDNVATPVVRHSVAYDHDHDYYSDDSVASYLREIGRVALLTYEQEIELA
KRLAEGDERTREEARNHLMEANLRLVVSIARKYSNRAGGLTLLDLIQEGNIGLMRAIDKY
DYKLGYKFSTYATWWIRQSVTRAIADQGRLIRLPAHLNEQLARVQRVRRDLVSRLNREPS
LEELAKDLEMPLVRLERLLAASQEAVSLETPVGDEGEGTSLGDFIEDPNSMDPVAQAGVE
AMKAAVQEALEKLTPREQQIIKLRYGLDEGGRPRTLEEVAREFGITRERIRQIEAKVLRK
LRHPRIGKVLRAFLDDQS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatgggacaaaaggcatcaaataccagcagttacataaatagtaaagctcaggccgta
catctcggcgaggaaacattgctaaacgggaactcatcagaagaaaccgaagaaacagac
gaacttgaaggctcgcttgacgagcctaccggcgctatgctggcagaagttgaggaactt
gagaaagacgctctaggagaaagtcttactcctgtcgataacgtagctactccagttgtt
cgacattctgttgcctatgatcatgatcatgattattacagtgacgatagtgtagccagc
tacctccgcgaaataggcagggtagctttactcacctacgaacaagaaattgaactggct
aaacgtttggcggagggcgatgagcgtactcgtgaggaagcccgtaaccacctaatggaa
gcaaacttgcgcttggtggttagtattgcacgcaagtatagtaaccgtgcaggcggctta
accttacttgaccttatacaagaaggcaacatcggattgatgcgcgccatcgacaaatat
gattataagctaggatataaattctctacttatgccacttggtggattcgccaatcggta
acacgtgccatagccgatcaaggacggctaattcgcttaccggctcacctaaatgaacaa
ctcgccagagtacaaagggtgcgacgtgatctcgtttctcgcctgaaccgtgaaccgagc
cttgaagaactggcaaaagaccttgaaatgccgctggtaaggcttgagaggctattggct
gccagtcaggaagctgtctcattggaaacaccggtgggcgatgagggcgaaggcacttct
ctgggagattttatcgaagaccctaacagcatggatccagttgcacaggctggcgtagaa
gcgatgaaggcagcagtgcaagaagcgctggaaaaacttacccctcgcgaacagcaaatt
attaaattgcgctacggactggacgagggtggcagaccacgcacccttgaagaggtcgcc
cgtgagtttggtattactcgcgaacgaattcgccagattgaggcgaaagtattgcgcaag
ttgcgccacccccgtatcggcaaagtcctgcgcgccttccttgacgaccagagctaa
DBGET
integrated database retrieval system
