Candidatus Chlorohelix allophototropha: OZ401_004164
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Entry
OZ401_004164 CDS
T09929
Name
(GenBank) PAS domain S-box protein
Organism
call
Candidatus Chlorohelix allophototropha
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS_3
PAS
PAS_4
PAS_8
HATPase_c
GAF_2
Response_reg
PAS_11
GAF
HisKA
PAS_10
MEKHLA
GAF_3
Motif
Other DBs
NCBI-ProteinID:
WJW68550
LinkDB
All DBs
Position
2:1920450..1925306
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AA seq
1618 aa
AA seq
DB search
MQHFEQTTISSANNKKYEDHNATENISSLILQEVLESTTNPCFSLDRNYCYTSFNKSHAQ
LMQRLYEVEIQLGQNQLDCITSEADREVAKYNLDRAFSGTAGKVETSFGIDENHRHYLKV
IHNPIRDSSGAIIGVVVLALDLNDQKQIENNHREGEERLHMALEAAKQGLYNLDLVTGQG
VINREYLSMLGYEPSSLIESLDSWVKLLHPDDLQHSLKVLNDCIVGKLTEYRMEYRMRTK
EGNWKWILSLGKVLERDADGKATRLIGTHTDITPQKAAETRILKLSNMYAALSQTNQAII
RIQERETLFKEVCRIAVEFGGLRMAWIGMPEPDGEYIVPVAKFGESLAYLDSIRIAVNSN
VPEGRGPAGVVFHSNRHYICNDFFNDPITLPWRTSAATFGFRSVAAFPLVLSDKVIGILT
LYSGEVGHFDDEIVQLLDEMVLDICFALTHFKNDEARARTEEALYKSEKLFRFLTENAAD
MIFRDKLDGSIEYISPVCRTLLGYEPEEMLGRLSTDFFHPEDKEAIYKNLRTKTYSTAVI
PLSHRMRRKNGEYIWVETNIQQIVDPISGKPSYFVGASRDITERVKAEQALRESEERFRL
VAASSSDMIWTMDMEGNFTYVSPAIVQLSDYTPEEVLKLNVKDTMTPQSAAIIQQGMIET
IKSVKNGTYKRQGKLFILEQYRKDGSMVWTEVSANLLLDATGNIRGFLGITRDITERLKT
DAALRESEERFRLVAENSNDVIWTMDMEGKFTYVSPSVFQLRGYTPEEVMQQTADESLTP
ESAAIMRQRLTEVIKAIQTGTYKRRKNLYQLEQPCKDGSTVWTEVSACVMVDDTGNIKGF
LGVSRDITERLKAEKALRESEEKYRQIFELDNEAIFLVEQATGLILDANDSATKIYGYTK
EEFKALRNTDISAEPEKTQELTSNRTFDSMLVPLRYHRRKDGSIFPIEMALRIFDLKGKS
VFVVAARDISERLKAEEALRNSEEKFSKIFNASPAAIIITSAEGQIVDINPSALKLSGYT
REESIEHNVMELGTWPEPEHRAYIGNMLLKQGYLHQVDTTYRIKNGDIRRVLAYYEIIEL
AGVKRILSMINDVTEIKHAEEALRNSEEKFSKVFKSSPLPIIISGLEDARILDANQQALD
FFGYAREEFIGHTAAELQMWVKPELRDMAVEQIKKQGYIHNFDNEYRLKSGEIRSVIASF
EIIELDGKPQVLSVLSDITERKRAQDELTKNREQLFQAQKMETVGKLAGGVAHDFNNLLT
VIQGYIDIWQFSLDEDDPHREELEEINKATQRATALTRQLLTLSRRQVVQTKEIDLNELI
RNLEKMLRRVIGEDVELVCELEKSLGKVKVDPGQIEQVILNLSVNARDAMPKGGRLKLKT
YNFEVNNDYADKHITIKTGSYIVLETSDTGKGMDKETLSHIFEPFFTTKETGKGTGLGLS
IVYGIVQQNEGHVWVYSEPMLGTTFKIFLPSLKEAGNVPTEATAESSAKVTGTETILLVE
DDEAIRKLAVRLLRNNGYKVLEAGDGIAALKLAQEYDAKIHLLISDVVMPRMGGPELAEE
IKSLISGLKVLFMSGYTGDFDIDGTLLPESTYIHKPFTTEEFSRKIREVLDAPLPETE
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgcaacactttgaacaaactacaatatcatcagcaaataataagaaatacgaagaccat
aacgccactgagaatatttcttcactaattttgcaagaagttttagaaagcaccaccaac
ccctgcttctctttagatagaaattactgctataccagtttcaataaaagtcacgcccaa
cttatgcaaaggttgtatgaggttgaaatccagttgggacaaaaccagttggattgtata
accagcgaagcagatcgcgaggttgccaaatataatctcgaccgcgcttttagcggtacg
gcaggaaaggtggagacttctttcggcatagatgaaaatcatcgccattatttaaaggtt
atccataatcccatcagagattctagcggggcaatcatcggcgtagtggtattagcgctg
gatttgaacgaccaaaaacagattgagaataaccatagggaaggtgaagaacgcctgcac
atggcgttggaggcggcaaaacaagggctttataatctggatttagtaacaggtcaaggc
gttatcaatcgcgaatatctcagcatgcttggctacgaaccttcctcgctgattgaaagc
ctagactcgtgggttaagcttttgcatcccgatgacctacagcatagcctaaaggtgctg
aacgactgtattgtcggtaaactcaccgagtacaggatggaataccgcatgcgcaccaaa
gagggcaactggaagtggattctttcgctcggcaaagtgctagagcgagatgcggatgga
aaagccacgcgcctgatcggtacgcacaccgatattacgccgcaaaaagcggctgaaacg
cgtatcctcaaattgagcaatatgtatgctgccctcagccagaccaatcaggcgataatt
cggattcaagagcgtgaaacattgttcaaggaagtttgccgcattgccgtagaatttggc
ggcttgagaatggcgtggatcgggatgcctgaacccgatggggaatatatagttccggtg
gcaaagtttggcgaaagtctggcttaccttgactctattaggattgcggttaactcgaac
gtaccggaagggcgtgggccagccggggttgtttttcattcaaaccgccattacatttgt
aatgatttttttaacgaccctataaccttaccgtggcgcacaagcgcagcgacatttggg
ttccggtctgtagctgccttcccgctggtattatccgacaaggtaattggaatattaacc
ctttattccggcgaagtggggcacttcgatgatgaaatagtccaattgctggatgagatg
gtattggacatttgctttgccttgactcattttaaaaatgatgaagcacgcgctcgtacc
gaagaagctttgtacaagagcgaaaagcttttccgattcctgactgaaaacgccgccgac
atgattttccgcgataagcttgacggttcaattgaatatatctccccggtttgccgcacc
ttattgggttacgaaccggaagaaatgttagggcgactatcaactgactttttccatcct
gaagataaagaagccatatataaaaacctccgcaccaaaacttacagtaccgcggtaatc
cctcttagtcaccggatgcggcgtaaaaacggcgaatatatctgggtagaaaccaatatt
cagcagatagttgaccctatttccggcaaaccctcgtattttgttggggcatcccgcgat
attaccgagcgagtaaaagcggaacaggcattgcgcgagagcgaggaacgcttccgcctt
gtcgccgcaagttccagcgatatgatttggacgatggatatggagggcaatttcacctat
gtcagccctgccatagtgcaacttagcgattatacgcctgaagaagttttaaaactaaat
gtaaaagacaccatgaccccccaatctgccgcaattatccaacagggtatgatagaaact
atcaagtctgtaaaaaatgggacttacaagaggcaggggaaattattcatattggagcaa
taccgcaaggatggcagtatggtatggacggaggtttctgccaacctactgcttgatgcg
accgggaatatcagaggctttctgggtatcacccgcgacataaccgagcggttaaaaacc
gatgctgccttgcgagagagcgaggaacgcttccgccttgtcgccgaaaattccaacgat
gtgatttggacgatggatatggagggcaaatttacctatgtcagcccttccgtatttcaa
ctcagaggctatacccccgaagaggttatgcaacaaacggcagacgaatcgttgactccc
gaatctgccgcaattatgcgccagcggttgactgaagtaattaaagctattcagacaggt
acttacaagaggcgcaagaacttgtatcagttggagcagccctgcaaagatggcagcacc
gtctggacagaggtttctgcctgcgtgatggttgatgatacagggaatatcaagggcttt
ctgggtgtttcgcgagacattaccgagcggttaaaagctgaaaaagccttgcgcgagagc
gaggaaaaatatcggcaaattttcgaactggacaatgaagctatattcctagttgagcaa
gctaccggcttaattctggatgccaatgattctgccaccaaaatttatggttataccaaa
gaagaatttaaggctttacgcaatactgatatttcggcggaaccggaaaaaacacaggaa
ctgacttctaacagaacttttgacagtatgctagtgccgctgcgctatcaccgccgcaag
gatggctcaattttccccatcgaaatggcgctgcgcatctttgatttaaaaggtaagtcg
gtattcgtggtggctgctcgcgacatcagcgagcggttaaaagccgaagaggcattgcgt
aactcggaagaaaaattctccaaaatctttaacgccagcccggcagcgattataattacc
agcgctgaagggcagattgtcgatattaaccctagcgcactcaaactttcaggctacact
cgcgaggaaagtatcgagcataacgtcatggagcttggcacatggcctgagcctgagcat
agagcatacatcggtaatatgctgcttaagcagggttatcttcatcaggttgacactacc
taccgtataaaaaacggggatattcgccgtgtgctggcttattacgaaatcatagaactc
gccggagttaaacgaattctgtcgatgattaatgatgtgaccgaaatcaaacatgccgaa
gaagccctgcgcaactcggaagaaaaattctccaaagtctttaaatccagtcccttgccc
attataatctcagggttggaagatgcccgtattctggatgccaatcagcaagcgcttgat
ttctttggctacgctagagaagaatttatcggacataccgccgctgagctacaaatgtgg
gtaaaacctgaactcagggatatggcggttgagcagataaaaaaacaaggctatattcat
aattttgacaacgagtaccgccttaaaagcggtgaaatccgcagtgtaatagcttccttc
gaaataattgaactcgatggcaagcctcaagttttgtcggtattgagcgacattaccgaa
cgcaagcgggcgcaagatgaattgacgaagaatagggaacaacttttccaggctcaaaaa
atggaaacggtaggcaagttggcaggcggagtggcgcacgattttaacaatctgctaacc
gttatacagggctacattgatatatggcagttcagtttagacgaggatgacccgcatcgg
gaagagctagaggagatcaataaagccacgcagagagctactgcgctgactcgccaattg
ctgacattgagccgccgccaagtagtgcaaaccaaagagatagatttaaatgagctaata
agaaatttggaaaagatgttgcggcgcgtgatcggcgaagatgtagaattggtatgtgaa
ctagaaaaaagcctcggtaaagtaaaagtagaccccggtcagatagagcaagttatttta
aacttgtcggttaatgccagagatgcgatgcccaaaggaggcaggttaaagctcaaaaca
tataattttgaggtcaataatgattatgccgacaagcatataacaataaagaccggctct
tatattgtgctggaaacaagcgatacaggcaaaggcatggataaggaaaccttgagccat
atctttgaaccattctttactaccaaagaaacggggaaaggaactgggttagggctttcc
attgtttacgggattgtgcagcagaacgaggggcatgtgtgggtgtatagtgaacccatg
ctaggcacaactttcaagatttttttacctagcctgaaagaggcaggaaatgttcccacc
gaagcgactgcggaatccagcgcaaaggtgaccggcacggaaactattctgttggtggaa
gatgatgaagcgattcgcaagctggcggtgcggttattacgcaacaacggctataaggtg
ctggaagcgggagatggtattgccgccctgaaattggcacaggaatatgatgctaagatt
catctgctgataagcgatgttgtaatgccccggatggggggacctgaactagccgaggag
attaaaagcttaataagcggcttaaaagtgctttttatgtcgggttataccggggatttc
gatattgatggaacactattgcccgaatctacctatattcataagccctttaccacagag
gaattttctcgcaagattcgcgaagtcctagacgcacccttaccagaaacggagtag
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integrated database retrieval system
