Candidatus Chlorohelix allophototropha: OZ401_004766
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Entry
OZ401_004766 CDS
T09929
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
call
Candidatus Chlorohelix allophototropha
Brite
KEGG Orthology (KO) [BR:
call00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
call03032
]
OZ401_004766
03400 DNA repair and recombination proteins [BR:
call03400
]
OZ401_004766
Enzymes [BR:
call01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OZ401_004766
DNA replication proteins [BR:
call03032
]
Prokaryotic type
DNA Topoisomerases
OZ401_004766
DNA repair and recombination proteins [BR:
call03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OZ401_004766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WJW70245
LinkDB
All DBs
Position
unnamed1:179754..182267
Genome browser
AA seq
837 aa
AA seq
DB search
MAKQTAFDFNQTGPVKPIEFHEIFGQNYGQYGLYVVQDRALPDARDGLKPVQRRILYTLF
EGRYLSSGPHRKSAEIVGKVLGDRHPHGDSSVYDAMSRMAQAFSLRYPLIDGQGNWGASD
GSPAAAYRYTEARLTPLAEALLSEDLKKETVPLLTTYKEDPKVVEPLYLPGHIPPCVNSI
DGIAVGISTTVPPHNLGESLRVCIAMLEAGVLEGHSFSTEQLMNYLPGPDFPEGGRVMLS
GGGVREYLETGRGRFIIRASVVQEQLTPTKKALVITGLPPIGRDKVIASIIDSINDRKAG
TEGLVAEPPLDETNEERTRIVLELKREANPAIVLESLYRHTLLQIAVSAQLYFLFAPKSH
RQAPATIPKQVGMVELLSYWLHHQLEVLERRLTFELNQYRVRLSTVEALIIGATHAQQLV
RIFQEAEGKAQAKLTLQHKYKLSEEQAEVIANMSLSQVTRPDAGRYQAERTELIGKIEHH
EELLSSRLKCISLLQQELRETEKKFGDGRRTVIDEAKLANPDVVAEVAQAQVREPLTLAL
YLDGTLKATSPDQFGTKSKAHKSDEGLIGLCAVAPEAFVLAGSNKGRIFSLPVEKLTLTT
RSGKSESLARHLKLEAGERVVQLLAVPGSAFGEGAAALYLVEITALGKVKKSPISEYRSV
NGAGLSSLKLAEGDEIISVMLSNGQGEYLLTTDTGQTLRFGDDKLNPQGRIGLGQVAMAL
DKEARIVSAHHWSGGDEGRAFLVTLSAQNILKKTGLAEYPAKGRATGGVVTTGLVGGDSI
AATWLARGEVTLLVVTESGSLTLPSSTLPTLPRARKGQQLEGLSGQGGTARIIQLVL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacaaaccgcctttgactttaatcagaccggaccggtcaaaccgatagaattt
cacgaaatattcgggcaaaactacggacagtacggcttatacgtcgtgcaagaccgggcg
ttaccagatgcccgtgacggactcaaaccagttcaacgccgcatcctttacaccctcttc
gaaggacgctacctatcctccggaccccatcgcaaaagcgccgaaatcgtggggaaagtc
ttgggagaccgccacccgcatggagatagctccgtgtacgatgccatgagccgcatggcg
caagccttcagcctgcgttaccccctcatagacggacagggcaactggggagcaagtgac
ggaagccccgcagcagcctatcgctacaccgaagcccgcctcaccccactggcagaggcg
ctcctatccgaagacctcaaaaaagaaaccgtccccctcctcaccacctacaaagaagac
cccaaagtggtcgaacccttgtacctgcccggacacatccccccctgcgtcaactcaatt
gacggcatcgcagtgggcatctccaccaccgtcccccctcacaacctgggggaaagcctg
cgggtgtgtatcgccatgctcgaggcgggagtgctagaagggcacagcttttcgaccgaa
cagctaatgaactacctgcccggacctgacttccccgaagggggcagagtaatgctctca
gggggaggagtgcgcgaatacctcgaaacagggcgaggacgcttcatcattcgtgccagc
gtagtgcaagaacaactcacccccaccaaaaaagccttggtcatcaccggcttacctccc
attgggcgggataaagtcatcgcctccatcatagactctatcaacgaccgcaaagcgggc
accgagggactggtggcagaacccccactggacgaaaccaatgaagaacgtaccagaatc
gtgctggaactgaagcgggaggcaaatccggcaatcgtcttggaaagcctgtatcgacac
accctcttgcagatagcggtcagcgcccaactctacttcctgttcgcccccaaaagccac
cgtcaagcccctgccaccatccccaagcaagtgggcatggtagaactcctgagctactgg
ctacaccaccaactggaagtgctggaaagaagactcacctttgaactcaaccaataccgg
gtgcgcctctcgaccgtggaagccctcatcatcggcgccacccacgcccaacaactcgtc
agaatcttccaagaagccgagggcaaagcccaggctaaactcaccctccagcacaaatac
aaactgagcgaagaacaagcggaagtaatcgccaatatgagcctgtcacaagtaactcgc
cctgatgccggacggtatcaggcggaaagaaccgaattgatcggcaaaatagagcatcac
gaagaactactctcctcccgcctcaaatgcatcagcctccttcagcaagagctacgcgaa
accgagaaaaagttcggggatgggcggcgcaccgtcatcgatgaggctaaacttgccaac
cctgacgtagtggcggaagtagcgcaggcgcaagtgcgggaaccgctgaccctcgccctg
tacctagacggcaccctcaaagccaccagccctgaccaattcggaacaaaaagcaaagct
cacaaaagtgatgaaggcttaatcggcttgtgtgccgtagcgccggaggcattcgtctta
gcaggcagcaacaaaggacggatcttcagcctaccggtggagaaactgacgctaaccacc
cgcagcgggaaaagtgagagcctcgcccgtcacctaaaacttgaggcaggagaacgggtg
gtgcaactcttggcagtgccgggatcagcctttggagagggagctgctgccttgtatctg
gtagagattaccgcactgggcaaagtaaaaaagagcccgataagcgaataccgcagtgtg
aacggggcgggattgagcagtttgaaactggcagagggagacgaaattatctccgtcatg
cttagtaacggacagggcgaatacctcctaactaccgacaccgggcagaccctgcgcttt
ggggacgacaagctcaacccgcaaggtcgcatcgggctggggcaggtcgccatggcgctg
gacaaagaggcgcggatagtaagcgcccaccactggtcgggaggagacgaggggcgcgcc
tttctggtgacactcagcgcccagaacatcctcaagaaaacaggtttagcggaatacccg
gcaaaagggcgggcaaccggaggagtggtaaccaccggactggtcgggggagacagcata
gccgctacttggcttgccagaggggaagtgaccctgctggtagtcaccgagagtgggagc
ctgaccctacccagttccaccctaccgaccctacccagagccagaaaagggcagcagtta
gaagggttgagtgggcagggagggacggctagaattattcaactggtgctgtaa
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