Calothrix sp. NIES-2098: NIES2098_01940
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Entry
NIES2098_01940 CDS
T08374
Name
(GenBank) chromosome segregation SMC protein
KO
K03529
chromosome segregation protein
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caln03036
]
NIES2098_01940
Chromosome and associated proteins [BR:
caln03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NIES2098_01940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
AAA_15
Crescentin
APG6_N
Fez1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAY07083
LinkDB
All DBs
Position
242560..246222
Genome browser
AA seq
1220 aa
AA seq
DB search
MVHVKRVELTNFKSFGGTTQVPLLGGFTVISGPNGSGKSNILDALLFCLGLASSKGMRAD
RLPDLVNNTQTAKSRATVEASVTVTFDITDAVSLNDTKAQIQDSLEEIEVIEVEETEETE
EDKSNSKLPNPETSNEWSVTRKLRVTHQGTYTSNYYINGASCTLTELHEALESLRIYPEG
YNVVLQGDVTSIISMNARERREIIDELAGVAAFDRKINQAKDTLDEVKEKEDSCRIIETE
LTVQRDRLSQDRAKAEKYQKLRAEYLSKQSWEAVLSWRSLQAQQEKLANQIQNGDRKSQE
LSAELTTLNTTIEQTTVELDQLNAHVKALGEEELLAVQSNLATQEAEHKQLQRQRSELET
ATQETAKRQAQNQQEIQQHQRSLEQIAETQVVEKQSIVYCQQQRDEAQQALETSRQAAAE
IASASEAWVQQQTALNRQIETLLQTLEPQRTEQAQLRERNDQLQQQIQEQTQLVATLEPE
LATKQAECSRLETEFNTSSEPIQNLAQNLAATEQELQIQQDTQKRLLQEQREKQRQLDKL
EAQAQAQQEVQGTQASKVIMQSGMPGLCGLVVQLGRVEPRFQLALEIAAGGRLGHIVVED
DGVAAAGIELLKQKRAGRATFLPLNKINAPRFTQDATLRLAGGFVNYAVNLVECDRRYKD
VFSYVFGNTVVFSTLEQARKNLGLYRIVTLDGELLETSGAMTGGSNNQRSSLRFGNVEAA
EPEEVAALRNRLGEIERVLERCTEAINKLSIKTKALAQEVTEARQARREQQLQLEQLQKE
IKTLTAQLENTRSQLAQNSEKFATAQSRLEVLARELPGQETQLQQLRQTLAELEASQTPS
EWQQIQATIKNQEQQLQQRETALREAEQRLKNLENQQQRLQEKIQEAEERITQYQQEQET
QQNQLTALSTQHSALSTQIAETRVRLSQMELNLGEEKQKRDRTEQELRSHLLRQQQLEWE
LQKLQETLVARREELVNVKEQLQTLAPELPDPLPEVPDQVDLEELQKELRSLAKRLQAME
PVNMLALEEYERTQNRLQELTQKLETLEAERTELLLRIENFTTLRQRAFKEAFDAVNENF
QSIFATLSDGDGYLQLDDPEDPFSSGLNLVAHPKGKPVQRLASMSGGEKSLTALSFIFSL
QRYRPSPFYAFDEVDMFLDGANVERLAKMIKQQAKQAQFIVVSLRRPMIESAERTIGVTQ
ARGAYTQVLGIKLQTDHTSA
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgtaaagcgcgtcgaacttaccaattttaagtccttcggtggtactacccaa
gttcctttgctgggggggtttactgtcatatctgggccgaatggttctggtaaatcgaat
attcttgatgcgctgctgttttgtctcggactcgccagttctaagggaatgcgagccgat
cgcttaccagatttggtaaataatactcaaacagctaaaagtcgtgcgactgtggaagct
agcgtcacggtgacatttgatattactgatgcagtctcccttaacgatactaaggcgcaa
attcaagacagcctggaagaaatagaagtaatagaagttgaggaaaccgaggaaactgag
gaagacaagtcaaactcaaaacttcctaatcccgaaacgtcgaatgagtggagtgtcacc
agaaagctgcgggtgacgcaccagggaacttatacgtcaaattactatatcaatggcgca
tcttgcactctcacagaattacatgaagccttggagtcgctgcggatttatcccgaaggc
tacaacgttgtccttcaaggggatgtcaccagcattatctcgatgaacgccagagaacgg
cgggaaattattgatgaattggcgggggtagcagcgttcgatcgcaagattaaccaagcc
aaggatactttagatgaggtgaaggagaaggaagatagttgtcggattattgagacagaa
ttaactgtacaacgcgatcgcctttctcaagaccgagccaaagccgaaaaatatcaaaaa
ctccgcgcagaatatctatctaaacaatcctgggaagctgtgttatcgtggcgttctcta
caagcacagcaagaaaaattagctaaccaaattcaaaatggcgatcgcaaatctcaagaa
ctttcggcggaactgacaactcttaacactacaatcgagcaaacaaccgttgaactcgat
caactcaatgctcatgtgaaagctttaggggaagaagaacttttagccgtacaatctaac
ctcgccacccaagaagccgaacacaaacaactccagcgtcagcgcagcgaattagaaaca
gctacccaagaaactgcgaaacgtcaggcgcaaaaccagcaagaaattcaacagcaccaa
cgttccttagaacaaattgcggaaacccaggttgtcgaaaagcaatcgattgtttactgt
cagcaacaaagagatgaagcacaacaagctttagaaacttctcgccaagcagcagcagaa
attgcttcggcttcggaagcttgggtacagcaacaaacggcgttaaaccgtcaaatagaa
actctgctgcaaactctcgaaccgcaacgcaccgaacaagcacagctaagagaacgtaac
gatcagctacagcagcaaattcaagagcaaacccagctagttgccactttagaaccagaa
ttagccacaaaacaagctgagtgtagtcgtttagaaacagaatttaacacctctagcgaa
ccaatccaaaacttagcgcaaaatctcgccgctaccgaacaagaactgcaaattcaacaa
gatacgcaaaagcggcttttacaagaacaacgggaaaaacaacgacaattagataaacta
gaagcgcaagcgcaagcacagcaagaagttcaaggaacgcaagctagcaaagtcatcatg
caatcgggaatgccgggactttgtggcttagtggtacagttaggcagagtcgaaccccgc
tttcaactggctttggaaattgctgcgggtggacgtttgggacatatagtggtggaagat
gatggggtcgccgctgcgggaattgaacttttaaagcagaaacgcgccgggagagctacc
tttttacccttaaataaaattaacgctcccagatttacccaagatgccacactgcgttta
gctggtggtttcgttaactatgctgttaacttagttgaatgcgatcgccgttataaagat
gtctttagctatgtttttggtaacaccgtagtattttccaccctcgaacaggcgcggaaa
aacttaggcttataccgcatcgtcactctcgacggggaattattagaaactagtggcgca
atgactggtggtagtaacaaccagcgttcatcgttgcggtttgggaacgtggaagccgca
gaaccggaggaagtagccgctttaagaaaccgcttaggggaaattgaacgagttttagaa
cgttgtactgaagccatcaataagctgtcaatcaaaaccaaagccttggcgcaagaagtc
acagaagcacgtcaagcacggcgagaacagcagttgcaattagaacaattgcaaaaagaa
attaaaactttgacagcgcagttagaaaatacgcgatcgcaattagcgcaaaatagtgaa
aaattcgccactgcgcaatcgcgcttggaggttctggctcgggaattaccaggacaagaa
acgcagttgcaacaattgcgacaaactttagcagaattagaagcatcgcaaacccccagc
gaatggcaacaaattcaagcaactattaaaaaccaagagcaacaattacaacaaagagaa
acagcattacgcgaagccgaacaaagattaaaaaatctcgaaaatcagcaacagcgcttg
caagaaaaaatccaagaagcagaggaacgaattactcaataccagcaagaacaagagaca
caacaaaatcaattaacagcactcagcactcagcactcagcactcagcacgcaaattgct
gaaacccgtgtaaggttgagtcagatggaacttaatttaggcgaagaaaaacaaaaacgc
gatcgcaccgaacaagaattgcgatcgcatctcctgcgtcagcaacaattagaatgggaa
ttgcaaaaactccaagaaactctcgtagcacggcgagaggaattagttaacgtcaaagag
caactgcaaaccttagcaccagaactgcccgatcccttaccagaagtcccagatcaagta
gacttagaagaattgcagaaagaattgcgatcgcttgccaaacgcctgcaagcaatggaa
ccagtaaatatgctggctttggaagaatacgaacgcacccaaaaccgcctgcaagaactg
acacaaaaactggaaaccctagaagcagagcgcacagaattacttttgcggattgaaaac
tttactaccttacgtcaacgcgcctttaaagaagccttcgacgcagttaacgaaaacttc
caatcaattttcgccaccctttccgacggtgacggctacctgcaactagacgatcccgaa
gatccctttagcagtgggttgaatttagttgcacaccccaaaggtaaaccagtgcagcga
ttagcttccatgtctgggggtgaaaaatctctgacagctttaagctttatcttttccctg
caacgctatcgcccttcacccttctatgcctttgacgaagtagatatgtttttggatggg
gcaaacgtagagcgattagctaaaatgattaaacaacaggcaaagcaagcacaatttata
gttgtgagtttgcgccgcccgatgatagaatcagccgaacgcacaattggcgttactcaa
gcacggggagcgtatacccaagttttgggaattaaattgcaaaccgaccatacatctgct
tga
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