Calothrix sp. NIES-2098: NIES2098_02090
Help
Entry
NIES2098_02090 CDS
T08374
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
caln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_02090
03070 Bacterial secretion system
NIES2098_02090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_02090
02044 Secretion system [BR:
caln02044
]
NIES2098_02090
Transporters [BR:
caln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2098_02090
Secretion system [BR:
caln02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES2098_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
cNMP_binding
AAA_22
ABC_ATPase
AAA_29
KAP_NTPase
AAA_16
DUF87
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAY07098
LinkDB
All DBs
Position
complement(264105..267026)
Genome browser
AA seq
973 aa
AA seq
DB search
MKPAITQTEILAFLIDTPPFNTLPFNTLKNIAFNCQLLQYRTGQWMLVKERMPAQVMVIY
QGQARVLGYDQWTNSQISLAVVEEGEFLGWLGLLRGFSCEAVMASTDAIAITLEAAEFLQ
LMDTEPEFAEAVRSRPHISEVFELLSLEIQRHADATTDIKDLAREVWQQTQVVNLVPGPV
NSQQFNKRHLWLVSAGSIEGMTVGYRLALDGSQEIWENTAAVRLIGIPWQSPNEYGASLT
ITPAPEYPPDPIVENLAPAQTIFVSGNGVIDAPLACFQMLNQILGGSFRRDLIRKVLTNQ
LKTHKQISLPVAGAVIEMMGLQAQLVTVPAHVINRLTAPALIYWRDNLALLYKITERELV
VAAPETGVCQYSPAEFAQIWGESGQVLTVEKAEGDRPEKFSLRWFLPSIYKYRLVLVEVL
VASFFVQIFGLANPIVTQIIIDTVLIQKSLDTLDILGIFLLVIGVFEAALTSLRIYLFAD
TTNRIDIRLGSEVIEHLLKLPLSYFERRRVGELAGRINELENIRSFLTGTALTVVLDAVF
SVIYIGIMLFYSWMLTLVALATVPLFAILTTFVVPIVQRQLRTKAERHADTQSYLVEILT
GIQTVKAQNIELKSRWQWRDRYTRYISAGFKNVLTSSTANSISGFLNQFSSFVLLWVGAH
LVISNQLTLGQLIAFRIIAGYVTSPLLRLIQLSQNFQEVALSIERLSDILDTAPEVQPSD
RNNIALPEIAGAIKYNGVSFGFNPEDSLKLININLEIAPGTFVGIVGQSGSGKSTLTKLL
PRLYEPVAGHIQIDGYDIRKVELNSLRRQIGIVLQDTLLFEGTIQDNIALIRPDATTEEI
IAAAKVAAAHDFIMALPNGYNTIVGERGSALSGGQRQRIAIARTVLQNPRLLILDEATSA
LDYELEQQVCRNLMEFFQGRTVLFITHRLNTVRNADTIIIMDRGVIAEQGTHAELMAMKG
RYYCLFQQQESQL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagctatcacccagaccgaaattttagccttccttattgacactcccccgttt
aatacactgccatttaataccttaaaaaacatcgcctttaactgccaactattgcaatat
cgcaccggacaatggatgttggttaaagaaagaatgccagcacaagtcatggtgatttat
caaggacaggcgcgggtattaggttacgaccaatggacaaactcacaaattagtttggct
gtagtagaagaaggagagtttcttggttggttgggattgttgcggggattcagttgcgag
gctgttatggcctccacagatgcgatcgcgataactctagaagccgcagaatttctacaa
ttgatggatacagaaccagagtttgccgaagcagtgcgatcgcgtccccacattagcgaa
gtttttgaactcttaagtctggaaattcagcgtcatgcagatgcaaccaccgatattaaa
gatttagcacgtgaagtttggcaacaaacgcaggtagtaaatttagttccggggccagtt
aattcccagcagtttaacaaacggcatttgtggctagttagtgctggcagtatagagggt
atgactgttggctatagattagcgttggatggctctcaagagatttgggaaaatacagcc
gcagtccgattaattggtattccctggcagtctcctaatgaatatggtgctagtttaact
attactccggctccagaatatcccccagaccccattgtcgaaaatctagcaccagcacaa
acgatatttgtatcgggaaacggagttattgatgctcctttagcctgtttccagatgttg
aatcagatattggggggttctttccgccgcgatttaattcgcaaagtcttaaccaatcaa
ctaaaaacgcacaagcagatttccttaccagtggctggtgcagttatcgaaatgatgggt
ttgcaagcccagttagttacagttccggctcatgtaattaatcggttgactgcgccagcc
ttgatttattggcgagacaatcttgctttgctatacaaaattaccgaacgggaattggtt
gttgcggctcctgaaacaggagtatgccaatattctcctgcggaatttgcccaaatttgg
ggagagtctggacaagtattgacggtggaaaaggcagaaggcgatcgccccgaaaaattt
agtctgcgttggttcctaccttccatctataaatatcgtctggtgttggttgaagtcctg
gtggcttccttttttgtgcagatatttggtttggcaaatccgatcgttacccaaatcatc
atcgacactgtattaattcagaaaagtctggataccctcgatattttgggcattttcttg
ttggtaattggagtgtttgaggcggctttaacgagcctgcggatttatctatttgccgac
actaccaaccgtattgatatccgtttgggttcagaagttattgagcatttactcaaatta
cctctgagttattttgaacgtcgtcgcgtcggagaattagcaggacgaattaacgaacta
gaaaatattcgttcttttctcacaggaacagcattgacagtggtactagatgctgtgttc
tctgtgatttatatcggcattatgctgttttacagctggatgctcaccctcgttgcctta
gctactgtgccattgtttgccatcttgacaacctttgtggtgccgattgtgcagagacag
ttacgcacaaaagccgaacgccacgccgatactcaatcctatttagtggagattctcact
ggcattcaaacagtcaaggcacagaatattgaattaaaatctcgttggcaatggcgcgat
cgctatactcgttacatcagtgctggctttaaaaatgtcctaacttccagtactgctaat
tctatcagtggatttttaaatcaattttcgagttttgtgttgttgtgggtaggcgcgcat
ttagtcatctccaatcaactcactttaggacaattgattgcctttcggatcattgctggt
tatgttactagtcccttgctgcggttaattcaactatcacagaatttccaagaagtagca
ttgtctatcgaacgccttagtgacattttagatacagcaccagaagttcagccaagcgat
cgcaacaatattgcactaccagaaattgcaggtgcaattaaatacaatggagtttccttt
ggatttaacccagaagatagtttaaaactgatcaatatcaatttagaaattgccccagga
acttttgttggtattgtcggtcaaagcggctctggtaaaagcactttgacaaaattatta
ccgcgtctgtacgaacctgtagccggacacatccaaatagatggttatgatataaggaaa
gtagagttaaactccttacgccgccaaattgggatagtgttacaagatacccttttattt
gaagggacaattcaagataatattgctttaattcgtccggatgccactaccgaggaaatc
atcgccgccgccaaagttgcagcagcgcacgatttcatcatggccttacccaacggctac
aacaccattgttggggaacgaggttctgccctttctggaggacaacgccaacgcattgcg
atcgctcgtaccgttttgcaaaatcctagattactgattcttgatgaagctactagtgct
ttagattacgaattagaacaacaagtctgtcgcaatctgatggagttttttcaaggtcgt
actgttttatttattacccaccgactcaacactgttagaaatgccgacaccatcatcatt
atggatcggggtgtaattgccgagcaaggaacccacgccgaactcatggcaatgaaagga
cgctattactgtctgtttcaacaacaggaatcacagttatga
DBGET
integrated database retrieval system
