Calothrix sp. NIES-2098: NIES2098_04280
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Entry
NIES2098_04280 CDS
T08374
Name
(GenBank) tRNA-pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caln03016
]
NIES2098_04280
Enzymes [BR:
caln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NIES2098_04280
Transfer RNA biogenesis [BR:
caln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES2098_04280
Prokaryotic type
NIES2098_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAY07313
LinkDB
All DBs
Position
534300..535160
Genome browser
AA seq
286 aa
AA seq
DB search
MLESHQPTGTHRVALVIQYLGTHFHGWQRQKQQRTVQEEIETAIAKILGYHVTLHGAGRT
DAGVHAAAQVAHFEATGLIPPHKWAAILNSYLPNDILIRASAGVGNRWHARFSAAYRRYR
YTIYTEDQPNLFVRPFSWHYYYAPLDESLIKAALKPLLGKHHLAAFHRAGSKRSHSWVEV
QAAECHCSGPLIHIEIQADGFLYGMVRLLVGMLVQVGTGQRTLANFTELWKAERREEVKY
AAPAQGLCLLRVGYPDFPFSSDVWYENLPKFVFSQEEPAPWAGFPT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaagccaccagccaacaggaactcatagagtcgccctggtaattcaatacctg
ggcactcattttcatggctggcaaaggcaaaagcagcagcgtacagttcaagaagagata
gaaactgcgatcgctaaaattcttgggtatcatgtgacactacatggtgcgggtagaacc
gatgctggagttcatgccgccgcccaagtagcccattttgaagcgacaggtttgattcca
cctcataaatgggcagccatccttaatagctatttgcccaatgatattttaatcagggcg
tcagcaggtgtaggtaatcgttggcacgctcgctttagtgcagcctatcggcggtatcgc
tacaccatatacacagaagatcagccgaacttgttcgtcagacccttcagttggcattat
tattatgcacccctagatgaatccttaattaaagctgccctaaaacccctgctgggaaag
catcatctggctgcttttcaccgtgcaggctcaaagcgatcgcattcttgggtagaagta
caagcagcagaatgtcattgcagcgggccattaattcatattgaaatccaggcagatgga
tttttgtatggcatggttcggttgttggtagggatgctagtacaagtaggtactggacag
cgcaccctagctaactttactgaattgtggaaagctgaacgacgagaagaagtgaaatat
gccgcacctgctcaaggcttatgcttgttacgagtcggctatccagatttccctttttcc
tcagatgtttggtatgaaaatctgccaaaattcgtttttagtcaagaggagccagcgccg
tgggcgggtttcccgacttga
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