Calothrix sp. NIES-2098: NIES2098_04920
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Entry
NIES2098_04920 CDS
T08374
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES2098_04920 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caln03032
]
NIES2098_04920 (dnaB)
Enzymes [BR:
caln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NIES2098_04920 (dnaB)
DNA replication proteins [BR:
caln03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NIES2098_04920 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
Intein_splicing
DnaB
LAGLIDADG_3
AAA_25
ATPase
Motif
Other DBs
NCBI-ProteinID:
BAY07376
LinkDB
All DBs
Position
complement(596486..599152)
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AA seq
888 aa
AA seq
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MAEELSFKGDGSDAYGNPSGQRLPPQNIEAEEAILGGILLDPEAIGRVSDRLVAEAFYIS
AHKDIYQAALRLHAQSKPTDLLSVTSWLADNDLLNRIGGRNKLATLVDRTVSAVNIDSLA
DLVMDKFLRRQLIKAGNEIVHLGYETEKELPIVLDQAEQKVFGITQERPQTGLVHIADTL
ISNFQDIEERNQGIALPGITCSFYDLDAMTSGFQRSDLIIVAARPAMGKTAFCLNLAYNI
AASHRFPVAVFSLEMSKEQLVQRLLASEAGIESGYLRSGRLSQAQWEPLSRAIGMLSEMP
IFIDDTPNITVTQMRSQARRLQAEQGMELGLIVIDYLQLMEGAGDNRVQELSKITRSLKG
LARELSVPIIALSQLSRGVEARTNKRPMLSDLRESGCLTGDSLVTLADSGRQVPIRELVG
KSGFAVWALNETTMQLEKAIVSHAFSTGIKPVFTLKTRLGRKIRATANHKFLTINGWCRL
DELSPQQYLCLPRYLPNPGKQTMTYAEVALLGHLIGDGCTLPRHAIQYTTKEIDLAENVV
FLAKEVFGDAIIPRISPERGWYQVYLSAAERLTHSVRNPIAKWLDFLGVFALRSHEKFVP
QELFSQPQELIACFLRHLWSTDGSVKLLGGKKPRPIAYYASSSERLAADVQTLLLRLGIN
ATLRSIPQVGKGRDQHHVTITGKPDLELFIQKVGGIGKYKLASLQQISQHLENCIHNTNR
DIVPKDVWKKYVVPAMQAARITTRLLHFELGMSYSGSTLYKANLSRERSLKVAKIVQSSE
LLTLSKSDVYWDEIVSIECSYEEEVFDLTVPGLHNFVANNIIVHNSIEQDADLVIMLYRD
DYYNNDSPDRGIAEVIVAKHRNGPTGTVKLLFDPQFTKFKNLARPNNY
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaactaagttttaaaggcgatggtagcgatgcctacggcaacccctccggg
caacgcctcccaccccaaaatattgaagcggaagaagcgattttggggggaattttgcta
gatccagaagcgattggtagagtgagcgatcgcttagttgctgaggctttttatattagt
gcccataaagatatttatcaagcagcgctacgacttcacgcgcagagtaaacccacagac
ttgctctcagttactagttggctagctgataacgatctgctaaaccgcattggcgggaga
aataaattagccacccttgtagaccgcacagtgtcagcagttaatatcgactccttagcc
gatttggtaatggataaattcctgcggcgacagttaattaaagctggcaatgaaattgtg
catcttgggtatgaaactgagaaagaattaccaattgttttagaccaagcagaacaaaaa
gtttttggtataacgcaagaacgtccccaaacaggactagttcatattgcagatacatta
attagtaattttcaggatattgaagagcgaaatcaaggtattgctttacctggaattacg
tgcagtttctacgatttagatgccatgaccagtggctttcagcgttccgatctaattatt
gtcgctgctaggccggcaatggggaagacagcattttgcttgaaccttgcttataatatt
gcagcttctcatagatttcccgttgctgttttcagtttagaaatgtctaaagaacagctg
gtgcagcgtctattagctagcgaagccggaattgaaagcggttatctacggagtggcagg
ctaagtcaagcacagtgggaacctttaagccgtgcgattggtatgctttctgagatgcca
atttttattgatgacacgccgaatattaccgttacgcaaatgcgcagtcaggcgcggcga
ttgcaagcagaacaaggcatggaattgggattaattgtgatagattatttgcaattaatg
gaaggagcaggtgataaccgcgtacaagaattatctaaaattacacgttctttgaaaggt
ttggcacgggaattatcggttccaattattgctttatcgcagttaagtcgaggtgtagaa
gcacgtactaataagcgtccgatgttatcagatttacgcgaatctggttgcttaactggt
gatagtttagtgacattagcagatagcggtcggcaagttcctattcgagaattagtaggt
aaatctggttttgcggtttgggctttaaatgaaaccacaatgcagttagagaaggcaatt
gttagccatgccttttctacaggtatcaagcctgtatttactctaaaaactcgattgggg
cgaaaaatccgagccactgctaatcataagtttttaactattaatggttggtgcagacta
gatgaattaagtcctcaacaatatttgtgtttacctagatatttacccaaccctggtaaa
caaactatgacttatgcggaggtggcattattaggacatttaatcggtgacggttgtaca
ttgccacgtcatgctatacagtacactaccaaagagattgatttagctgaaaatgtcgtt
ttcctagcaaaagaagtttttggagacgcaatcattcctagaatttcacctgaacgtggc
tggtatcaagtttacttgtcagcagcagaaagactaactcatagtgtgagaaaccctatc
gccaaatggctagattttcttggggtttttgccttaaggtctcatgaaaaatttgtacct
caagaattgttctcacaaccacaagagttaatagcttgctttctcagacatctgtggagt
acagatggttctgtgaagttgcttggaggtaaaaaaccaagacctattgcgtattatgca
agcagtagcgaaagactagctgctgatgtacagacgcttttattaagacttggtattaat
gctactctcaggtcaattcctcaagttggtaaaggtagagatcagcatcatgtaacaatt
actggtaagcctgaccttgaattatttattcaaaaggttggaggcataggaaaatacaag
ctagcttctttacaacaaatttctcaacatctagaaaactgtattcataacactaataga
gatatagttcccaaagacgtttggaaaaaatacgttgtacctgcaatgcaagctgcgaga
ataacaacacgattattacattttgaactcggaatgtcctatagtggttctacactttac
aaggcaaatttgagtcgtgaaagatctctaaaagttgccaaaattgttcaatctagtgaa
ttactgactcttagtaagagcgatgtttattgggatgaaatagtttcaattgaatgtagt
tatgaggaagaagtatttgacctaactgttcctgggttacacaattttgttgcaaataat
attattgttcataattctatcgaacaagatgcggatttagtaattatgttgtaccgcgat
gattactacaataatgacagtcccgatcgcggtattgccgaagtaattgtagctaaacac
cgcaacgggccgacaggtacagttaagcttttattcgatcctcaatttacgaagtttaag
aatttagctcgacccaataattattaa
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