Calothrix sp. NIES-2098: NIES2098_11430
Help
Entry
NIES2098_11430 CDS
T08374
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES2098_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_11430
Enzymes [BR:
caln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NIES2098_11430
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NIES2098_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BAY08016
LinkDB
All DBs
Position
complement(1374870..1375652)
Genome browser
AA seq
260 aa
AA seq
DB search
MKIATWNVNSIRTRLEQAIDWLNQNPVDVLCLQETKVVDADFPRSPFEKLGYQVYISGQK
AYNGVALISRQPLLDVSTGFTSIVPNLQPEWDEQKRVITGMIDDVRIVNLYVPNGSSVGS
EKYEYKLRWLTVLREYLQILLKSQSAICVCGDFNIALEAKDIHEQVKADNHIMASEPERQ
ALRDILTLGFADAFRKFTSEGGHYSWWDYRTAAFRRNLGWRIDHHYLTPVLYESAKSCII
DVAPRKLPQPSDHTPVIVEF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgcaacttggaacgtcaattcaattcgcactcgtctagaacaagcgatcgat
tggttaaaccaaaacccagttgatgtactttgcttacaagaaacgaaagttgtagatgca
gactttccgcgatcgccatttgaaaaactaggctatcaagtttatatttccggacaaaaa
gcatacaacggtgtagctttaattagccgtcaaccgctgttagatgtcagtactggattc
acatcaattgtgcccaatttacaaccagaatgggacgaacaaaaacgcgtaattacggga
atgattgatgatgttaggattgtgaatctttatgttcctaatggttcatctgtaggtagt
gaaaaatacgaatataagctgcgttggctgacagtattgcgcgagtatttacaaatacta
ttaaaatcccaatctgctatctgtgtatgcggtgactttaatatcgctttagaagccaaa
gatattcacgagcaagtcaaagccgacaatcacatcatggcatccgaaccagaacgccaa
gccctacgggatatattaacgctgggatttgctgatgcttttcgcaaattcacctctgaa
ggcggacactacagttggtgggactatcgcaccgccgcttttcgacgcaacttagggtgg
cggattgaccatcattacctcacgccagttttgtatgagagcgctaaaagctgtattatc
gatgttgcaccgagaaagttaccccaacctagcgaccatacaccagtaattgtggaattt
taa
DBGET
integrated database retrieval system
