Calothrix sp. NIES-2098: NIES2098_11980
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Entry
NIES2098_11980 CDS
T08374
Name
(GenBank) DSH domain-containing protein
Organism
caln
Calothrix sp. NIES-2098
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_cyano_M
DEAD
ResIII
Helicase_C
DEXQc_Suv3
FTA4
MTR4-like_stalk
nSTAND3
nSTAND_NTPase5
AAA_22
ATPase_2
MSD5
MetOD2
Phage_scaffold
ATPase
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
BAY08071
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Position
1444431..1447103
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AA seq
890 aa
AA seq
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MNYPAPSPELDLRSIFPFNLDRFQEDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALA
RGKRVFYTTPLKALSNQKLRDFREKFGFDLVGLLTGDASINRDAPIIVMTTEIFRNMLYG
TPIGQIGISLVDVEAVVLDECHYMNDRQRGTVWEESIIYCPREVQLVALSATVANSDQLT
DWLNRVHGPTDLIYSDFRPVPLEFHFCNPKGLFPLLNDSKNKINPRLANRGKRRQGDKGK
GGRPEAPGIIYTLSQLQQRDMLPAIYFIFSRRGCDKAVAEVGDLWLVNNDESQVLRRQID
DFLTRNPEAGRSGQIAPLYRGIAAHHAGILPAWKVLVEELFQQGLIKVVFATETLAAGIN
MPARTTVISTLSKRTDTGHRLLNASEFLQMAGRAGRRGMDLQGHVVTVQTPFEGSKEAAY
LATSKPDPLVSQFTPSYGMVLNLLQTHTLEETRELIERSFGQYMATMHLRPNYEEIAELQ
AQLEQLQEQIDAVDENELAVYEKLRQRLKVERQLLKTLQHQAQEDRKEQIGMLLGFAVAG
TLLSLKGKNITVPSPIAAVLIGKSPHSEQSPCLVCLGRDNRWYVATTDDIVDLYAELPRI
DVPPEIIPPPDLVFKPGQIRRGDEQTATIAQQIPESGESLYMAPEVAEQLSRMTAVQEQL
EAHPIHKSGNAAAIFKRKARYVELEAELQLLQEHVEQQSQHHWEEFLNLIEILQHFGCLD
NLVPTALGQVAAAIRGENELWLGLVLASGELNNLDPHHLAAAVAALVTETPRPDSKVRFD
LSNQVVDALAKLRGIRRQMFQMQRRYNVALPIWLEFELIALVEQWALGVEWTELCENTTL
DEGDVVRILRRTLDLLSQIPHVPNLPDSLQRNAYRAIQLIDRFPVNEVVE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatcccgcaccatctccagaacttgacctcaggtcaatattcccgtttaatctg
gatcgatttcaagaagacgcgatcgcctccctcaatgctgggcgatctgtagttgtatgt
gcgcccacaggttcgggcaaaacattagttggcgaatacgcgatttatcgtgccctagcg
cgaggaaaacgtgttttctacaccactccgttgaaagcgctgtcaaatcaaaaattacgt
gactttcgcgagaaattcggcttcgatctcgtcggactgttaactggagatgcctccatt
aatagagatgcaccgattatcgtcatgaccacagaaatttttcgcaatatgctctatggc
acacccatagggcaaatcggtatttctttggtagatgtagaagcggtggtactagatgaa
tgccactacatgaacgatcgccaacggggaaccgtttgggaagaatctattatctattgc
ccgcgtgaagttcaattagtagccctttccgccacagtagccaatagcgatcaacttacc
gattggctaaatcgcgttcacggcccaactgacctgatttactccgattttcgccctgta
cccctagaatttcacttttgcaatcctaaagggctgtttcctctactaaacgacagtaaa
aacaaaatcaatcctcgcctagctaacagaggcaaaagaagacaaggagataaaggcaag
ggtggtagaccagaagctcctggcataatttataccttgagccagctacagcaacgggat
atgttacccgcgatttactttatctttagccgccgaggatgtgataaagcggtagcagag
gtaggcgatctatggctagtaaataatgatgaatcccaggtattacgccgccaaatagat
gactttttaacccgtaatcccgaagccggacgttctggacaaattgcccccctctaccga
ggaattgctgcccaccatgccggaattttacctgcgtggaaagtcttagtagaagaacta
tttcaacaggggctaattaaggtagtctttgccaccgaaaccctagccgcaggaattaat
atgcctgcccgcacaactgtcatatctaccctttctaagcgtaccgacaccggacaccgc
ctcctgaacgcctcggaattcttgcaaatggcaggacgggctggccgtcgaggcatggat
ttacaaggtcatgtcgtgacagtacaaactccttttgaagggtctaaagaagcagcatat
ttggcaacatctaaacccgaccccttagtgagccagtttacccccagttacgggatggta
ctgaacctgctccaaacccataccttagaggaaactagagagttaatcgaacgcagtttt
gggcagtacatggccaccatgcatttacggccaaattacgaagagattgccgaactccaa
gcccaattagagcaacttcaggagcaaattgacgcagttgatgaaaatgaactagctgtt
tatgagaaattgcgacaacgcctgaaagttgaacgccaattattgaaaactctgcaacat
caagcccaagaagaccgcaaagagcaaataggaatgctgttaggctttgctgtagcagga
acactgttgagtctcaagggtaaaaatatcacagtcccttcaccaatagcggcagtgtta
attgggaaaagccctcattctgagcaatcaccttgcctggtatgtttgggacgcgataat
cgctggtatgtagccacaactgacgatatagtcgatttgtatgcggaactaccacgaatt
gatgtaccgcctgaaataattccaccacccgatctggtttttaaaccaggacagattcgt
cgtggtgacgaacaaacagcaaccattgcccagcagattcccgaatcaggggagtctcta
tatatggctccggaggtagcagaacagctcagtcggatgactgctgtacaagagcaatta
gaagctcatccaattcataaatcgggcaatgccgccgctattttcaaacgtaaggcacgt
tacgttgaattagaagccgaacttcaactgttgcaagaacacgtagagcaacaatcccaa
catcattgggaagagtttctcaatttaattgaaattttgcagcactttggttgtttagat
aacttagtaccaacagcattaggacaagttgccgcagctatccgcggagaaaatgaatta
tggctgggtttagtacttgccagtggtgaattgaacaatttagatccgcaccacttagca
gcagcagttgcagctttggtgacagaaactccgcgtccagatagcaaagtgcgtttcgat
ttgagcaatcaagttgtagatgctttggcaaaattgcgaggaattcgtcgccaaatgttc
caaatgcaacgacggtataatgtagcgctgcctatctggttagagtttgagttaattgct
ctggtggaacagtgggcgctgggagttgagtggacagaactatgtgaaaataccacttta
gatgaaggcgatgtggtgagaatattacgccggacgttggatttattatctcaaatccct
cacgttccgaatttgccggattctttgcaacgtaatgcctatcgcgctatacagttaatt
gatagattcccagtgaatgaagtagtggaataa
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