Calothrix sp. NIES-2098: NIES2098_12630
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Entry
NIES2098_12630 CDS
T08374
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
caln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_12630
03070 Bacterial secretion system
NIES2098_12630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_12630
02044 Secretion system [BR:
caln02044
]
NIES2098_12630
Transporters [BR:
caln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2098_12630
Secretion system [BR:
caln02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES2098_12630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
AAA_22
Peptidase_C70
Peptidase_C39_2
AAA_30
NB-ARC
AAA_16
AAA_29
nSTAND3
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAY08135
LinkDB
All DBs
Position
complement(1518680..1521799)
Genome browser
AA seq
1039 aa
AA seq
DB search
MPSEFPPTKLAEQLTQTLGVNISEQELLDAVKAIKIHEPQIAKLFWQAAGSTPGIYIVLT
GKVRLLDTSHNLIATFSTGDSFGHLTLFSQEEFSPYNARASTNLKLGYLPGDILQNLMSR
YPEIQQHLYHQAEAWDLLLLCSQNSPEPRIAPVEETLKVLSLFQQHHLEIGYLPPQLTQD
SKLWLLRRGELLHSDGRTLTPGRIYQPSSRSNRGGGWQAIQPTELYSLSHLDWQTALQHL
PQLTEFVTSDTKDSEEEEEEDTLSENEEVLRYRDDVPLHSRSRTSNSYTFPTGSPQRQTR
PAKRRAYFPNPSVTINHWWGRISKRYPFFQQQSASDCAASCLVMIGRYWGKNFSLNRLRD
IANTSRSGASLRGLAAAAETIGFSTRPVKASFDKLAQQPLPAIAHWQGKHYIVVYEISKK
RVIVGDPAIGQRTLTPREFTANWTGYALLLQPTSEFKETEEANTPFWQFFELVKPHWLVL
LEVVIASIFIQVFGLVTPLLTQLLLDRVIVQGSTITLHAIGLGLLIFGLFRVAVNGLRQY
LLDHTANRITLSMIVGFIKHTFRLPLSFFESRYVGDIISRLQENHKIQRFLTGESLSIFL
DLLTVFIYIGLMFWYSWKMALLVLVILPPIVLITVIATPFLRRISREIFNAIAAESSYLI
EALTGIKTIRSMAIEQTVRWKWEERLHQSIKKGFSGQIISNQLQIASGTIETIATTSLLW
FGAWLVIQNQLTIGQLIAFNMLLGNVIRPFQRLAVLWNQLQEVMISSERINDVLETEPEE
DLQASPKQFLPRLRGYIRFENVTFRYHPESEMNILENISFTAQPEQTIAIVGRSGSGKTT
LSKLILGLYPATEGKVLIDNYDLSNVAFKSLRSQIGVVDQDTFLFGGTIRENISIAHPEA
TLEEVVEAAHLAGADEFIQQLPMGYETPIGEGGGLLSGGQRQRLAIARALLGNPSLLLLD
EATSHLDAESERIIQNNLKTITQGRTTLIIAHRLSTIRNADLILVLDKGALVESGTHEEL
IKTKGYYYYLNQQQLAQAV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagaatttcccccaactaaactggctgaacaactcacccaaaccttgggtgta
aatatttcagaacaagaactactagacgctgttaaagctataaaaatccacgaaccacaa
attgcaaaattattctggcaagcagcaggttcaacaccaggtatttacatagttttaaca
ggaaaagttagactactagacacatctcataatttaatcgcaactttctctacaggcgat
tcatttgggcatctgactcttttttcccaagaagaatttagcccttataatgccagggct
tctactaatttaaagcttggttatcttccaggcgatattttgcaaaacttaatgagcaga
tatccagagattcagcagcatctatatcaccaagcagaagcatgggatttattgttgtta
tgttctcaaaattccccagagcctcgcattgctcctgtggaagagacgttgaaagttttg
tctctgtttcaacaacatcatctagaaataggctacttaccaccacaactgactcaagat
agcaagttatggctgttacgtcgtggggaattactacattcagatggtcgtactttaacc
ccaggaagaatttatcagccttccagccgcagtaatcgcggcggtggttggcaagcaatt
caacctacagaactttacagtctgagccatttagactggcaaacagcattgcaacactta
ccacaattaacagagttcgttacttctgatactaaggactcggaggaagaggaggaagaa
gatacactctctgagaatgaagaagttctgagatatagagatgatgtccccttacattct
cgttctcggacttccaattcttatacattccctacaggatctcctcaacgtcaaacaaga
ccagctaaacgccgcgcttactttcccaaccccagcgtcaccatcaaccattggtgggga
agaatcagcaagcgctatccattctttcaacagcagagtgcttctgactgtgcggcgtct
tgcttggtaatgattgggcgctattggggtaaaaactttagtttaaatcggctgcgagat
atcgctaatacgagtcgcagtggcgcatcattgcggggtttagcagcagccgcagagacc
ataggcttttctacacgacctgtaaaggctagtttcgataaattagcacaacaacctttg
cctgcgatcgcacattggcaaggcaagcattacatcgtcgtctatgaaattagcaaaaaa
cgggtaattgttggcgatccggcgatcggacaacgcactctcactcctagggaattcacc
gccaactggactggttatgcattgttattacaacccacatcggaatttaaagaaaccgag
gaagcaaatacaccattttggcaattctttgagttagtcaaaccacactggttagtattg
ctagaagtggtgattgcttcgatatttattcaagtatttgggttggtgacaccactatta
actcagttacttttggatcgggtaattgtgcaaggtagcactatcaccttacatgctatt
ggtttaggcttattaatttttgggctgtttcgagtcgccgtcaatggattgcgacagtat
ttattagatcacacggcgaatcgaattactttatcgatgattgtgggttttattaaacac
actttccgattacctttatcgtttttcgagtcgcgttacgtcggtgatattatttctcgc
ctccaagaaaatcataaaatccaacgctttttaactggtgaatccctgtcaatatttctc
gatttattaacagtattcatctatatcggattgatgttttggtacagttggaaaatggca
ttgttggtattggtaattttaccacctatagtattaattaccgttatcgccacgccattt
ttacgccgtatatccagagaaatatttaatgcgatcgcagctgaaagtagttacctcatt
gaagccctcacaggtattaagactatcagatcgatggcaattgagcagacagtgcgttgg
aaatgggaggaacgcttacatcaatcaattaaaaaaggattctctgggcaaattattagt
aatcaactgcaaattgccagtggtactattgaaactatcgccaccactagcttactctgg
tttggggcttggttagtaattcaaaatcaactaacgattggacagttaattgcctttaat
atgttgttgggtaatgtgattcgtccatttcaaaggttggctgtgctgtggaatcaatta
caagaagtgatgatttcgagcgagcgaattaatgatgtcttagaaaccgaaccagaagaa
gatttacaagcttcaccaaagcagtttcttcccagattgcgtggttacattcggtttgaa
aatgtcacatttcgctatcatcccgaaagtgagatgaacattctggaaaatatcagcttt
acagcgcagccagaacaaacaattgctatcgtcggacgtagcggttctggtaaaaccaca
ctttctaaattaattttaggtctttatcccgctaccgaaggcaaagttttaattgacaat
tatgatttatctaacgtagctttcaagtcgctgcgttctcaaattggggttgtggatcaa
gataccttcttattcggcggtacaattcgcgaaaatattagtattgctcatcctgaagcg
actctagaagaagttgtcgaagcagcacatttagctggagcagatgaatttattcagcaa
ttaccaatgggctatgaaactccaattggtgaaggtggcggacttctatctggaggacaa
cgacaacggttagcaatcgctcgtgctttattaggaaatccctcgttattattattagat
gaagctacgagccatcttgatgctgaatcagaacgcatcattcaaaataatctcaaaaca
attactcaaggacgtacaaccctgataattgcacatcgcctttccactatacgcaatgct
gatttgattttagttttagataaaggtgcattagtggaaagcggtactcatgaggaatta
attaaaaccaaaggttattactactacctcaaccaacaacaattagctcaagctgtttga
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