Calothrix sp. NIES-2098: NIES2098_13260
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Entry
NIES2098_13260 CDS
T08374
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_13260
Enzymes [BR:
caln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES2098_13260
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NIES2098_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Peptidase_C14
Helicase_C
ResIII
DEXQc_Suv3
Peptidase_C13
IstB_IS21
Helicase_dom4_arc
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAY08198
LinkDB
All DBs
Position
1589609..1592596
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AA seq
995 aa
AA seq
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MTLVATFIGVNQYADNNIPDLAGASNDATALWALFSDSILDIKTHHLLNTQATGKAIRDA
LNDTFNQTGPDDTALFFFAGHGSPSHQLVPHDARREALGETTIAMSELNNYLKSSNARIA
IVILDCCFSGGATARVLQNVPTSRNTMMTVADLQGKGRVIIAASKDNEEAHELNGHGLLT
QALLHTFKLHPTGIEIGGITDEVTQRVRSEASRFGFHQTPVIFNLIEGGLKLPPLSPGTR
YAQAFPNTVGVKVSLNIEDLAAFNLPSQLINAWKAQFVNGLNALQLKAVNEYRVLDHRSL
LVVAPTSSGKTFIGEMAAAKAIAQGKKTVFLLPFKSLTNEKYEDFQALYGEQLGLRVIRC
TGDYSDNTDHFIRGKYDIALLTYEMFLGLSVSVPSLIHKIGLVILDEAQFITDPNRGIAV
ELLLTSLLNARKQGVKPQILALSAVIGDINYFNDWLECETLSSNERPVPLVEGVLDRNGM
FQYIGLDQQEHVEQFLPPGAIVQRKSKPELQDIIVPLARKLIAEKEQLLIFRNQRGSAVG
CSLYLASELGLMPASNVLAQLPVHDRSTASSNLCTALTGGTAFHNSDLIREERLAVEQEF
RQLQSTIRVLAATTTVAAGINTPASTVIIPETFFYGDEKREFTVAEYKNMAGRAGRLGLS
SSGRSILLAENAMERDRLFRRYVQGNPEPICSSFDSAHIETWILRLLSQIKQIPKKEVIH
LLASTYGGYLASRQHPDWHQVTEPRLEELLTKMDLLGLLEEDDEQIRLSLLGKACGRSNF
SFSSALKLVDLLKRFPENLSAEQLMAYLQVLPEVAGYISVSKKGTKESTWAHEINTYYGD
AVTAAFQRGAKDQFDYYGRCKRAAILWNWINGQPIETIENKFSATPYAGNVGANDIRSCA
DRTRLYLQSAYDIVSLLLLGKGPDEIAINTILQQLEFGLPADALGLIHLPVTLSRGEYLA
LYQAGYVTSKEVLQSLEKLPPLLSETRIKQFMVEM
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgactttagtcgccacctttataggtgtaaatcagtatgcagataataatatccctgat
ctggctggcgcatcaaatgatgccacagcactttgggcactattctcagattcaatctta
gatattaaaacccatcatctacttaatacccaagcaacgggtaaagccataagagatgca
ctcaacgatacattcaatcaaacagggcctgatgatacagcccttttcttttttgcaggt
cacggatctccctcacaccagcttgttcctcatgatgcgcggcgtgaagcactaggggaa
actacgatcgcgatgagtgaattgaacaactacctaaagtcatcgaacgcacgtattgcc
attgtcatacttgattgctgctttagcggtggcgcaactgcacgtgtgcttcaaaatgta
cctacgtcgcgtaacacaatgatgaccgttgcggatctgcaaggtaaaggaagagttatt
atcgctgcatcaaaagacaatgaagaagcgcatgaactgaatggacatggactccttaca
caggcgttactgcatacttttaagcttcatcctacgggtattgagataggtggaataacg
gacgaagtgacgcaacgggtgagatctgaagcgagccgttttggttttcaccaaactcca
gtgatttttaatcttattgaaggtggactcaagttacccccgctgagtcctggcactcgc
tatgcacaagcatttccaaatacagttggtgtcaaagttagcttaaatattgaggatcta
gctgcgtttaatcttccgtctcaattaatcaatgcctggaaagctcaatttgtgaatggg
cttaatgctctccaactaaaagcagtgaacgaataccgtgtgcttgaccaccgttctctt
ctagttgtagctcctacaagttccggcaaaacgtttattggagaaatggctgctgctaaa
gcgatcgctcaaggaaaaaagactgtattcttattaccgtttaagtcacttactaatgag
aagtatgaagattttcaagctttgtatggggagcaattagggcttcgagtcattcgttgt
acaggtgattattcagacaatactgaccattttatacggggaaaatacgatatagcactt
ctcacgtatgaaatgtttttaggattatcagtcagtgtaccatcgctcattcacaagatt
ggattggtcattttagatgaggcacaatttattactgaccctaatcgcggtattgcagta
gaacttttacttaccagtttgctgaatgcacgaaagcagggtgtaaaaccacagatactc
gcactctcagccgtaattggtgatattaattattttaacgattggcttgagtgtgaaacg
ctttccagcaatgagcggccagtaccacttgttgagggagtattagatagaaatggtatg
ttccaatatattggtcttgaccagcaagagcatgtagagcagtttttaccaccaggtgca
attgtacaacgtaagagtaaaccggaattgcaggatatcatcgtccccttagccagaaaa
cttattgctgagaaagagcaattgcttatttttcgcaatcaacgtgggagtgctgtaggc
tgctccctttatcttgccagtgaattggggcttatgccagcaagcaacgtattggcacag
cttcctgtacacgatcgttcaaccgcatcatcgaacctgtgtacagcattaacaggtgga
accgcctttcataattcagacttaataagggaagaacgcttggcggttgaacaagaattt
cgacagcttcaaagtaccatccgtgtgctcgctgcaacgacaacagttgctgctggcatt
aatacacctgcgtccaccgtcattattccagagactttcttttatggtgatgaaaaacgt
gagtttaccgtagcagaatataaaaatatggccggacgtgcaggaagattggggctttcg
tcgtcagggcgtagcattctattggctgaaaatgctatggaacgcgatcgtttatttcgt
cgatacgtacaaggcaacccagagccaatatgttcttctttcgattctgctcatatagaa
acatggatacttcgcctacttagccaaattaaacaaattcctaaaaaagaagtgattcac
ctgcttgccagcacgtatggtgggtatttagcgagtcgtcaacacccagactggcatcaa
gtgacagagcctcgcctagaagagttgctgacaaaaatggatttgttgggcctacttgaa
gaagatgatgagcaaataaggcttagtctccttggaaaggcatgtggaagatcgaatttc
tcattttcctctgcattaaaacttgtcgatttgctcaaacgttttcctgagaatctttca
gcagaacagcttatggcatatctgcaagttttaccggaagttgctggttatatctcagtg
tctaaaaagggaacaaaagaatctacttgggcacatgaaataaatacttattatggagat
gccgtgactgctgcatttcaacgaggtgcaaaagatcagtttgactactatggacgctgt
aaacgggctgctattttatggaattggattaatggacagccaatagaaaccattgagaac
aaattttcagcgactccatatgctggaaatgtcggagctaatgatattcgcagttgtgca
gaccggacacggctatatcttcagtctgcttatgatattgttagtcttttattactgggg
aaggggccagatgaaattgccataaatactattcttcaacagctggaatttggtttgcca
gcggatgcgttaggcctcattcacttacctgttaccttgtcacgaggcgaatacttagcg
ttgtatcaggcagggtatgtaactagcaaagaagtacttcagtcgttagagaagttacct
ccgctgttgagtgagacaagaataaagcaattcatggtagagatgtaa
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