Calothrix sp. NIES-2098: NIES2098_14670
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Entry
NIES2098_14670 CDS
T08374
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caln03016
]
NIES2098_14670
Enzymes [BR:
caln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NIES2098_14670
Transfer RNA biogenesis [BR:
caln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES2098_14670
Prokaryotic type
NIES2098_14670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAY08338
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Position
1775653..1776534
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AA seq
293 aa
AA seq
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MQGFLNLNKPFDWTSHDCVARVRKLLRLKRVGHAGTLDPAATGVLPIAFGKATRLLQYLP
GNKAYKATIRLGVRTTTDDLQGEIITSAPCPGLSLAEVKSVLPQFEGKIEQIPPSYSAIQ
VDGKRLYDLARRGEKVEVPVRTVEVFQIEILDWREGEYPELEIAIACGAGTYIRAIARDL
GAILETGGTLAALIRTESSGFHLSDSITLADLEAQLQAGTFQPTAPDTALQYLPSVTLPA
TAAQKWCQGQRVPVTIDISGLVRVYDEESRFLGIGQSQAGVLIPQMVFEPVSS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggtttcttaaacttaaacaaaccatttgattggacttctcatgattgtgtggcg
cgagtcagaaaacttttgcgcctcaaacgtgtgggacacgcaggaactttagatcctgcg
gctactggagtgttaccgatcgcatttggtaaagctacaagattattacagtatttacca
ggtaataaagcttataaggctactatccggctaggcgtgcgtactacaaccgacgattta
caaggggaaataattacctctgcgccttgtcctgggttaagtttggcagaggtaaaaagt
gtattacctcaatttgaaggcaaaatagagcagattccgcctagctacagcgccattcaa
gtagatggtaaacgcttatacgatctagcacggcgcggtgaaaaagtagaagttccagtt
cgcacggtggaagtttttcagatagaaattttagattggcgagaaggagaatatcccgaa
ttagagattgcgatcgcttgtggtgctggtacatatattagagcgatcgctcgcgattta
ggagccatcttagaaactggtggaaccctcgccgctttaatacgtacagaaagcagtggt
ttccatttgagcgatagtatcaccttggctgacttagaagcacaactgcaagcagggaca
tttcaacctacagcccctgataccgctttgcaatatttgccatctgtgactttaccagca
acagctgctcaaaaatggtgtcaaggtcagcgagttcctgtaactatagatatatctggg
ctagtgcgagtttacgatgaagagtctcgctttttggggattggacaatcacaagctgga
gtgctgattccccaaatggtatttgaacctgtttcctcataa
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