Calothrix sp. NIES-2098: NIES2098_17520
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Entry
NIES2098_17520 CDS
T08374
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caln03032
]
NIES2098_17520
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_17520
Enzymes [BR:
caln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES2098_17520
DNA replication proteins [BR:
caln03032
]
Prokaryotic type
DNA Topoisomerases
NIES2098_17520
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES2098_17520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Mut7-C
Motif
Other DBs
NCBI-ProteinID:
BAY08592
LinkDB
All DBs
Position
complement(2113416..2115572)
Genome browser
AA seq
718 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSEILGAEWIVRASCGHIRELSDQGEDSLGFSMDNGNVKCNYVP
RDQRSKETIQQLKTVAKQVSEVVLATDPDREGETIAWHLKEVLGLREAKRVVYTEITASA
VRNAIAHPRKLDLNLVGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQNFVPQDYWSVWVDYVEGFRAFYHGMGNAPQDAAQQETEVHDDTKINNQTAPEST
RVLSEAEANRLVEEAKRHPHQIVQYEGKVTNRQPPPPFITSTLQQAAGSRLRFAPEKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCESARQWLEQNDPQNVPQRTARHRSNKTAQEAHEA
IRPTDVFRPSAELRVQLPADEFNLYVLIWKRAIASQCRPAQLRKTKVIIKSGEIFWQARG
QVIEFLGYARYWPNLGKDTILPALQQGQMLTLADAGHEKKQTQPPPRYSEPKLVQLMERK
GIGRPSTYSPTIATLKKRDYIQLTKESIQPTTLGLEVDVFLQKALPDLLEAEFTAKMEDA
LDAIASGKQPWQQYLTSWNQNYFAPALAKAKTVVVSSTNGVKTAAVAERKFETSRTRCPQ
CNNCLAKIPSSKVKKKYFLKCNSGCDNIVLFWNELQKAWEAPRNKETKEEKSPAKISSYP
CPVCKKFLEEYSYTKDGQRKTMLRCSDPQSRQDKKHKDVAYFHTQKGWWSPKYGEMKS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgccttttagttgtcgaatctcccggtaaagttaaaaaactcagcgaaatt
ctcggtgctgagtggattgtacgcgccagttgcggtcacattcgcgaactcagcgaccaa
ggggaagattcgctgggatttagtatggataacggtaacgtgaaatgcaactatgttccc
cgcgaccaacgttccaaagaaacgatccagcaattaaagactgtcgccaaacaggtaagc
gaagttgttttagcaacagatccagatcgagaaggggaaacgatcgcttggcatcttaag
gaagtgttaggtttaagagaagccaagcgagtagtctatacagaaattaccgcatcggct
gtcagaaatgcgatcgctcatccgcgaaaacttgacttaaatttagtcggtgcaggtttg
tgtcgagattgtctagataaactagtaggctataaaggcagcccgttagtatgggcttta
aataatggtgctaagagtgtaggcagagttcagagtgccacattacacctaatttgtcag
cgagaacgcgaaatacaaaactttgttccccaagattactggagtgtctgggtagactac
gttgaaggattccgggctttttatcacgggatgggaaatgctccccaagacgcagcccag
caggaaacagaggtacacgatgatactaagatcaataatcaaacagcgccagaatctacg
cgcgtactttccgaagccgaagccaaccgcctagttgaagaagcgaaacgccatccccac
caaattgtgcaatatgaggggaaagtaaccaaccgccaaccaccgccaccatttatcacc
tctaccctgcaacaagcggctggttcgcggttgcggtttgcgccagagaaaactatgcaa
gtagcccaaaagctgtatgaagccgggttaattacatatatgcgtacagattcagtgatg
ctaagtcctgagttttgtgaaagtgcgcgccagtggttagaacaaaacgatccgcagaat
gtaccgcaacgcacagcgagacatcgcagcaacaaaactgcgcaagaagcccatgaagcg
attcgtccgacagatgtatttcgcccttcggcggagttacgagtgcaattgcccgccgac
gagttcaacttgtatgttttaatttggaaaagagcgatcgcttctcaatgtcgccctgct
caactgcggaaaaccaaagtcattattaaatctggagaaatcttctggcaagctagaggg
caagtaattgagtttttaggatatgcgcgctattggccaaatcttggaaaggatactatc
ttacctgctttgcaacagggacaaatgctaactttagcagatgcaggacacgagaaaaag
caaacccaaccgccaccgcgttacagcgaacccaaattagtgcaactgatggagcgtaaa
ggcattggtcgtcccagcacttattctcccaccattgccaccttaaaaaaacgcgattat
atccaattaacaaaagaaagtatccagccgacaactttagggctagaagttgacgttttt
ttacaaaaagccttaccggatttactagaggcagaatttaccgccaaaatggaagatgcg
ttagatgcgatcgcatccggaaaacagccttggcagcaatacctcacaagttggaatcaa
aattactttgcaccagcattagcgaaagccaaaactgtagttgtgagttcaactaatgga
gttaaaactgctgctgtcgctgaacgcaaatttgaaacttctagaactcgttgccctcaa
tgtaataactgtcttgctaaaattcctagcagtaaagtcaaaaagaagtatttcctcaaa
tgtaatagcggctgtgacaatattgtcttgttttggaatgaattacagaaagcttgggaa
gcaccgcgaaataaagaaaccaaagaagaaaagtctccagcaaaaattagttcctatccc
tgtccagtgtgcaaaaagtttttagaggaatacagctacaccaaagatggacagcgtaaa
accatgctgcgatgttccgatccccaatctcgtcaagataagaaacataaagatgtagct
tactttcatacacaaaaaggttggtggagtccgaaatatggggagatgaaatcgtaa
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