Calothrix sp. NIES-2098: NIES2098_18720
Help
Entry
NIES2098_18720 CDS
T08374
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln00300
Lysine biosynthesis
caln00470
D-Amino acid metabolism
caln01100
Metabolic pathways
caln01110
Biosynthesis of secondary metabolites
caln01120
Microbial metabolism in diverse environments
caln01230
Biosynthesis of amino acids
Module
caln_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES2098_18720
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES2098_18720
Enzymes [BR:
caln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NIES2098_18720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAY08712
LinkDB
All DBs
Position
2228815..2230092
Genome browser
AA seq
425 aa
AA seq
DB search
MANLTLELAQELLKVYGSPLYVYDGDRLRQTIKHITQAISYPRTQFRFASVTNGNIALLK
IFRAAGWGLHANTPGDIYLGLQAGFDPGDIVYSGSNLNRDEMVQVLDWGVRTLNLDSVNQ
VELFCEVFSHAETRRKVGAPASGDLNFSRQRRREGEVKLGLRVNLPEVTGDSRIGVRPEE
FDPAVAIAQQAGLKIKGLHFYRGTGTNATEAFTEVIDTVLATAQKLPDWEYLDFGGGFGY
PYHHGKAAFDWEEFGAKLSERITALGREIDLVIEPGRAAIAGCGTLLAQVVSVKWQAEKQ
IVGVDTTVANLSVPAVHGGYREIFAWKPGENTRIYPTDVCGNTTYSRDYLGKNCQLPALE
IGDIIAILDVGAYGYAMSSHFLHRPKPAEILLENNIHHLIRQREDYSVLLMNQILEEKSP
ITNDQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttaaccttagaattagcgcaggagttactgaaggtctacggttcgccgctt
tatgtgtatgatggcgatcgcttacgtcaaactattaagcacattactcaagccattagc
tatccccggacacagtttcgctttgctagcgttactaatgggaatattgcgttactcaaa
atttttcgtgctgctggctggggactccacgccaatacaccaggagatatttatctgggg
ttgcaagcgggttttgaccctggtgatattgtttacagtggcagtaatttaaatcgagat
gagatggttcaagttttggattggggggtgagaacgttaaatctcgatagtgtgaatcag
gtggagttgttttgtgaggttttttctcacgcagagacgcggcgaaaagtcggagcgccg
gcttccggcgatctgaacttttcaagacagaggcgcagagagggagaggttaagttgggg
ttgagggtaaatttaccggaagttactggcgatagtcgcattggtgtgcgtccggaggag
tttgacccagcggtggcgattgcgcagcaagcaggattgaaaattaaggggttgcatttt
taccgagggactggaactaatgcgacagaagcttttaccgaagtgattgatactgtgctg
gcgacagcgcaaaagttaccagattgggaatatttggattttggtggtggctttggctat
ccctatcatcacggtaaagcagcttttgattgggaagagtttggcgcaaagttgagtgag
agaattacagctttggggcgggaaatagatttagtaattgaaccaggacgagctgcgatc
gcaggttgtggtactttgttagcgcaagttgtttctgtaaaatggcaagccgaaaaacag
attgtgggagttgataccaccgttgcgaatctctcagtgcctgctgtacatggtggctat
cgcgaaatcttcgcatggaaaccaggagagaacacgcgaatttatcccactgatgtttgt
ggtaacacaacttactccagagattatttaggtaaaaattgccaacttccagctttagaa
attggggatattatcgccattttagatgtcggggcttatggttatgcgatgtcttctcac
tttttacatcgtcccaaacctgcggaaattttattagaaaataatatacatcatctaatt
cgtcagcgagaagattatagtgttttgttgatgaatcagatacttgaagagaaaagtcca
ataacaaatgaccaatga
DBGET
integrated database retrieval system